Clone FMO07208 Report

Search the DGRC for FMO07208

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:72
Well:8
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG17625-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07208.5prime Sequence

452 bp (452 high quality bases) assembled on 2008-10-06

> FMO07208.5prime
CAGTCGACATGTGTGGACGGGCTGTGCGCGATTGGTTGGTGCTATTGACC
ATGGAGAAGTACATTGGTAAATTCCTGGAGCGGGGGTACGACAGCATTGA
ACGCTGCAAGCTTATTATCGTAAGCGATCTGATCATGCTGGGAGTGGATA
ATCCCGCTCATAGGAAGCTCCTGCTCGAGGGAGTCCGGTTCTTGGTCAAC
GCACCCGAGCAGTTCATCTGCAAGGAGCCGTGTGAGCTGCATGAGGAGAT
TGAACTGAAATTAGACCCGGATGTTGAGTTGTTTGCTTCGCTAAAGTGCC
TGGAAAATGTTGATTTCCTAGAAACACCTGTTCCATATTCGCTAACATCT
CCACAAAAGACGCTCACAACTCGGGACTCTTGCAAATGGAATGTCAAAGG
TGTGGATCAGTTACCTTCCGATAACATATTTAACGCAAGCTTTCTAGACC
AT

FMO07208.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG17625-RA 559 CG17625-RA 56..481 9..434 2130 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22686904..22687329 9..434 2130 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:13:25 has no hits.

FMO07208.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:27 Download gff for FMO07208.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17625-RA 56..484 9..438 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:43:30 Download gff for FMO07208.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17625-RA 56..484 9..438 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:25 Download gff for FMO07208.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17625-RA 56..484 9..438 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:25 Download gff for FMO07208.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 22686904..22687332 9..438 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:27 Download gff for FMO07208.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18512626..18513054 9..438 99   Plus