FMO07210.5prime Sequence
491 bp (491 high quality bases) assembled on 2008-10-06
> FMO07210.5prime
CAGTCGACATGAGCATTCAAAGAAGCGAAAAGGAGGCCGCGGGCCAGCTA
CTGGATGACTTGTACCTGGACATGTTCCACCTCGTTGAGGAGCACACCCA
GTGTCGGATAAATTTGGAGCGATGTAACGCCAGTGGGGCGATTCTCCTGG
CCCGCACTAGATTTCAGCACGGAGGCAGCCAGTGCGTGTCCACGGCCCAG
ATTCCCACGGAGAACAGTGCCGAGTTTAACGCCCTCTGCCGGGTCGTGGA
CTCCACGGATGGCGTCTGCATCGAGCGACAGGCGGTTGACAAGTCCAAGG
GCTTCGTGGAGCCCCTGCATTGGTTCTCGGTACTGCCACCGATGAGCTTG
CGCAATGCTGTTAACAAGTTCAAGGACTGCATAGAGCTGGTCGCCGAGAG
CACTAATCTGCAGCGGCAGCTAGGAGAAGCGCTGGATTCGATCACAAAGC
TGCGAAGGAGTGCCCTGCTTAGCGCAAGCTTTCTAGACCAT
FMO07210.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14671-RB | 774 | CG14671-RB | 91..555 | 9..473 | 2325 | 100 | Plus |
| CG14671-RA | 629 | CG14671-RA | 91..555 | 9..473 | 2325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5564405..5564725 | 329..9 | 1605 | 100 | Minus |
| 3R | 32079331 | 3R | 5564196..5564340 | 473..329 | 725 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:59:25 has no hits.
FMO07210.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:21:46 Download gff for
FMO07210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14671-RA | 82..555 | 1..473 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:43:12 Download gff for
FMO07210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14671-RA | 1..468 | 9..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:23 Download gff for
FMO07210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14671-RA | 82..555 | 1..473 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:23 Download gff for
FMO07210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5564196..5564340 | 329..473 | 100 | <- | Minus |
| 3R | 5564406..5564729 | 1..328 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:21:46 Download gff for
FMO07210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1389918..1390062 | 329..473 | 100 | <- | Minus |
| arm_3R | 1390128..1390451 | 1..328 | 98 | | Minus |
