Clone FMO07214 Report

Search the DGRC for FMO07214

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:72
Well:14
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13042-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07214.5prime Sequence

377 bp (377 high quality bases) assembled on 2008-10-06

> FMO07214.5prime
CAGTCGACATGTACAAGTTGGTGGTGTTCTTCGCTCTGCTCGCCGTCGTG
GCTGCCCGTCCGGGTTATTTGGAGTCTGGTCCACTGCTCCACAGCTATGC
CGCTCCTGCCATCATCCATGAACCGGCTCTGGCCAAGGTGGGCGCCATCA
TCAAGACCGTGCCCAGTGCCGTCTCCCACCAGAGCATCAGCCAGGTGCAC
AGCTCGGCCCACATCATCCAACCGATTGTGGCTCCGGTGGTGAAGACCTA
TGCCGCTCCCATCATCAAGACTTATGCGGCTCCTGCCCTCCACACGACCC
TCCTCTCGTCTCCGTGGGCCGGACATGGTTGGGCTGGCCATGGCTGGGCT
CCGTCCTGGGCAAGCTTTCTAGACCAT

FMO07214.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG13042-RA 571 CG13042-RA 66..416 9..359 1755 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16308001..16308340 359..20 1700 100 Minus
Blast to na_te.dros performed on 2014-11-28 23:29:21 has no hits.

FMO07214.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:38 Download gff for FMO07214.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13042-RA 59..419 1..363 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:43:35 Download gff for FMO07214.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13042-RA 1..354 9..363 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:35 Download gff for FMO07214.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13042-RA 59..419 1..363 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:35 Download gff for FMO07214.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 16307997..16308342 15..363 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:38 Download gff for FMO07214.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16301097..16301442 15..363 98   Minus