FMO07216.5prime Sequence
392 bp (392 high quality bases) assembled on 2008-10-06
> FMO07216.5prime
CAGTCGACATGTTTCTCGCCAAGATTCTAATCCTGTGCACCGCCTGCGTG
TTGGTCAGTGCCACGCCGTTTGGACTCGGTGCACCAAAAGTCCTCGAAGG
CGAGGATCTGGCCAGTGCCCAGCAAACGCTTGAGGCATCCTTGACCAAAT
TGGCTGCTGGCGAAGGACCCCACTATCGCCTCTCCAAAATTCTTTCGGCA
ACGTCCCAGGTGGTCTCTGGCTTTAAGAATGATTACTCTGTGGAGCTGAT
CGATAATCAGGGTGCTACCAAGGTGTGCCAAGTGGACATCTGGTCGCAAA
GCTGGCTTCCCAATGGTATCCAGGTGACCTTCAGGTGCCCAAATGAACCA
GAACTGGTCAGGAAACACGATGCTGCAAGCTTTCTAGACCAT
FMO07216.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15369-RB | 542 | CG15369-RB | 55..420 | 9..374 | 1830 | 100 | Plus |
| CG15369-RA | 444 | CG15369-RA | 55..420 | 9..374 | 1830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9217148..9217344 | 178..374 | 985 | 100 | Plus |
| X | 23542271 | X | 9216926..9217095 | 9..178 | 850 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:13:41 has no hits.
FMO07216.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:31 Download gff for
FMO07216.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15369-RA | 55..423 | 9..378 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:43:36 Download gff for
FMO07216.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15369-RA | 34..402 | 9..378 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:30 Download gff for
FMO07216.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15369-RA | 55..423 | 9..378 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:30 Download gff for
FMO07216.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9216926..9217095 | 9..178 | 100 | -> | Plus |
| X | 9217149..9217347 | 179..378 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:31 Download gff for
FMO07216.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9110959..9111128 | 9..178 | 100 | -> | Plus |
| arm_X | 9111182..9111380 | 179..378 | 99 | | Plus |
