Clone FMO07217 Report

Search the DGRC for FMO07217

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:72
Well:17
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG5693-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07217.5prime Sequence

242 bp (242 high quality bases) assembled on 2008-10-06

> FMO07217.5prime
CAGTCGACATGCCTTGCATATTTAATCCGGGCTACATTGGACCCGATCCG
CCCTGCTGTGACCCCGATTGCTTGGAGGAGGGCCACTGCACGGTTCCGGA
GTGCGGAGTTTGCCCGGAGTCCCAACTACCCCGATGCAATCCCGCCCCAC
AATCCAACAAGGACGCGGCGAAGCAACCACTGGACCAGAAAGCCCAAAAA
GAACCGAAGCTCCGGGAACAGAAGGCAAGCTTTCTAGACCAT

FMO07217.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:51:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG5693-RA 590 CG5693-RA 156..372 8..224 1085 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18006782..18006998 8..224 1085 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:51:25 has no hits.

FMO07217.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:02 Download gff for FMO07217.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5693-RA 150..372 1..224 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:43:37 Download gff for FMO07217.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5693-RA 98..320 1..224 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:03 Download gff for FMO07217.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5693-RA 150..372 1..224 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:03 Download gff for FMO07217.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18006776..18007000 1..229 96 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:02 Download gff for FMO07217.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18006776..18007000 1..229 96 -> Plus