FMO07219.5prime Sequence
575 bp (575 high quality bases) assembled on 2008-10-06
> FMO07219.5prime
CAGTCGACATGTTCCTGAATGCCCTGCGAAGGATGCGCTGCCTGTGCGGC
GACAGGGAGATCAGTACCGAAGACATTGAACAGAGGGAGCCGGTAATGCT
GAACATCTACGACCTGTCCACCAGCAACAACTACACTTTTCCGCTGGGCT
TGGGTGTCTTCCATTCCGGCGTCCAGTTGTACGGGCGAGAGTACGCATTT
TTGGCGCTCAATCTCTCCATTTCCGGCATCTTTGAGATTCATCCCTGCAA
TGGGCAGGAGGAGTTGGGCGAACACTTCCGTTTCCGGAAGAGCATTCTGC
TCGGCTACACCGACTTTACCTGCGCTGAAGTGAAGCGCGTTATCAACCTG
CTGGGCTTCGAGTTCCGCGGGACCAGCTACCACTTGACCAGCAAGAATTG
CAACCACTTCTCCAACTGCCTGGCGCATCTCGTCTGTGGCCGTAAAATTC
CGCGTTGGGTCAACCGCCTGGCCTACCTCATAACGTGTGTCCCATTCCTC
GAACGCTTTGTGGTCTCCAGTCCATCACATTACCCTCACTTCCGTCAATT
TCAGCTCGCAAGCTTTCTAGACCAT
FMO07219.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12231-RA | 711 | CG12231-RA | 122..670 | 9..557 | 2745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19531073..19531621 | 557..9 | 2745 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:54:42 has no hits.
FMO07219.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:41 Download gff for
FMO07219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12231-RA | 115..680 | 1..569 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:46:43 Download gff for
FMO07219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12231-RA | 1..558 | 9..566 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:50 Download gff for
FMO07219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12231-RA | 115..680 | 1..569 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:50 Download gff for
FMO07219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19531063..19531627 | 1..569 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:41 Download gff for
FMO07219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19425096..19425660 | 1..569 | 98 | | Minus |
