FMO07234.5prime Sequence
692 bp (692 high quality bases) assembled on 2008-10-06
> FMO07234.5prime
CAGTCGACATGGTCAAGTTAACTCTATATGGTGTGAATCCCAGTCCACCA
GTTCGTGCCGTCAAACTCACTCTGGCTGCCCTCCAGCTGCCCTATGAGTT
TGTAAACGTTAATATTTCGGGTCAGGAGCAGCTTTCTGAGGAATATCTAA
AAAAGAATCCAGAGCACACGGTGCCAACACTGGAGGATGATGGTAACTAC
ATTTGGGACTCGCATGCCATTATCGCGTATCTGGTGTCCAAATATGCAGA
TTCGGATGCCCTGTATCCCAGAGATCTGCTCCAGCGAGCTGTGGTGGATC
AACGACTGCACTTCGAGACAGGAGTGGTTTTCGCCAATGGCATTAAGGCC
ATTACCAAGCCGTTATTCTTTAATGGCCTGAACAGGATTCCCAAGGAACG
CTACGATGCCATTGTCGAGATCTATGACTTTGTGGAGACCTTCCTCGCTG
GACATGATTACATTGCTGGGGATCAGTTGACCATTGCCGATTTTAGCCTG
ATCTCGTCGATTACCTCGCTGGTGGCGTTCGTGGAGATCGATAGGTTGAA
ATATCCCAGGATCATCGAATGGGTCAGGCGTTTGGAGAAGCTGCCTTACT
ACGAGGAGGCCAATGCGAAGGGAGCCCGGGAGTTGGAGACCATTCTAAAG
TCCACTAATTTCACCTTTGCAACCGCAAGCTTTCTAGACCAT
FMO07234.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstE5-RA | 734 | CG17527-RA | 28..695 | 7..674 | 3340 | 100 | Plus |
| GstE6-RA | 751 | CG17530-RA | 32..687 | 9..664 | 790 | 74.9 | Plus |
| GstE7-RA | 765 | CG17531-RA | 65..519 | 42..496 | 595 | 76.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18404632..18405299 | 7..674 | 3340 | 100 | Plus |
| 2R | 25286936 | 2R | 18406042..18406697 | 9..664 | 790 | 74.7 | Plus |
| 2R | 25286936 | 2R | 18406988..18407442 | 42..496 | 565 | 74.9 | Plus |
| 2R | 25286936 | 2R | 18408004..18408394 | 153..543 | 545 | 76 | Plus |
| 2R | 25286936 | 2R | 18397155..18397321 | 319..153 | 280 | 77.8 | Minus |
| 2R | 25286936 | 2R | 18403419..18403502 | 153..236 | 210 | 83.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:31:54 has no hits.
FMO07234.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:11 Download gff for
FMO07234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE5-RA | 20..702 | 1..682 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:46:56 Download gff for
FMO07234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE5-RA | 1..669 | 9..675 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:21 Download gff for
FMO07234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE5-RA | 20..702 | 1..682 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:21 Download gff for
FMO07234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18404624..18405306 | 1..682 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:11 Download gff for
FMO07234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14292129..14292811 | 1..682 | 98 | | Plus |
