FMO07235.5prime Sequence
1219 bp (1049 high quality bases) assembled on 2008-10-06
> FMO07235.5prime
CAGTCGACATGGCAGCGGCACCCGAGTGGCTTACCCACGAATACATCGAG
CATGCACTTCGCTGCCACTACAAGGATGAAGGACTAACCATAACTCAGCT
GCAGATAAATCCCGCCCTGGGGCCTGGTGAAAACTACGGCGGAGTTCTGA
CCCGTGCTCGAGTGGAGTTCACACTGTCTAACAAGGAGAAAAATGTGCAG
AACCTGATTGTAAAGACGGAAATCGATGATGATGAGTTGACCCAGGAACT
GATGGCCCCATATGATATTTACAACCGCGAGATGACCATCTACCAGGAAG
TGCTGCCCAAATGCAGGGAGCTGCTTAATGAGATCGGAGATACTGAAAGG
ATATTTCCCACGGCCATCTATGTGGATCGCGAGCGTATGGCCATTATCTT
CGAAGATCTTTCTGTGGTGGGCTACGTAATGGCCGATCGAGTGCGTCGCC
TCAACGAGGAGCACACTCACCTCATCCTGCGCAAGTTGGCCAAATTCCAT
GCCGCCACAGCGGTCTTGAACGAGCGACAAAGTGGATGCCTCGAAAGTTA
CGATCGTGGTTTCTTTAATCGCTATACAAACGCCTACAGTGGCTACTTTG
TGGGTGGTCTGCTGGCCGCCGCTCGCTGGATGAGCAAGGTGCCCACGTTG
GCCCACTACGGAGAGAAGCTATTCGCTTTGGCTCCGCACTACATGGACAT
CGGCAGGGAGTGCTTTGCACCCACTCCGGGTCAAGTTAATGTTCTGGCCC
ATGGCGATGTGTGGACCAACAATGTGATGTTCAAGTACGATCCGAATACG
GGACGACCCGTCGATGTGCTGCTCATTGACTTCCAGTACTCCTTCTGGGG
CTCCCCATGCATCGATCTCCATCACCTGTTCAATACTTCTCTAAAGGAGC
CACTGCGTAGAGATCAGCAGAACGGGCTCTTCCAGTCTACCACAAGATAT
CACTGAAACGTTAGAAAGCTCCACTTTCGTCAAATCAGATTCCAGTTTGC
ATCAGTTAAATGAAGGTGGAGCAAGAGATTCTTTGCTTTGCATTCTACGG
TAGTGGTGCAGCCAGTATGATAAGCCCAGATCCACGATGCTGTTTCCATG
CCTTGATGAACGATGAATGAGCCGTGACATTCGATTAGAACCGATTATAC
CACCTCAGGTCAACAAGTTACATTCCTAATCCCTCTCTCCTAAGAAAGAG
ACAGTGCTTGGATGAATTA
FMO07235.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10514-RA | 1358 | CG10514-RA | 39..1192 | 9..1149 | 5225 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25278782..25279808 | 1028..9 | 4730 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:40:53 has no hits.
FMO07235.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:13 Download gff for
FMO07235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10514-RA | 39..1196 | 9..1153 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:46:57 Download gff for
FMO07235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10514-RA | 12..1169 | 9..1153 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:25:23 Download gff for
FMO07235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10514-RA | 39..1196 | 9..1153 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:25:23 Download gff for
FMO07235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25278773..25279808 | 9..1035 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:13 Download gff for
FMO07235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21104495..21105530 | 9..1035 | 98 | | Minus |
