FMO07240.5prime Sequence
365 bp (365 high quality bases) assembled on 2008-10-06
> FMO07240.5prime
CAGTCGACATGTCCCACAAGTACACGGAGCTGATTAAGGTCGGCACGCAG
TATGCTCGCCGGATGAACTACCTCTCAAATCGCATTTTCGGCGAAGTGGC
TCGCACCACAAACGAGAAGTCCATGAAGGTGGTTCGCATGTTCTCGGAGG
AACCAATTCACAAACGGGACTACGTGATCAACTGGTATCCGCGGCACGTG
GAGACGCACTTGCTGATGAAGAACCTTCGCGACTACGGACTGTTCCGCGA
TGAGCACCAGGACTTCAAGGAGGAGATGAAGCGTCTGCGCAAGCTGCGCG
GCAAGGCGCCTCCCAAGAAGGGCGAGGGCAAGCGGGCCTCAAAGAAGGCA
AGCTTTCTAGACCAT
FMO07240.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:29:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpS33-RA | 491 | CG10406-RA | 118..456 | 9..347 | 1695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:29:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16436080..16436300 | 347..127 | 1105 | 100 | Minus |
| 3R | 32079331 | 3R | 16436359..16436480 | 130..9 | 610 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:29:40 has no hits.
FMO07240.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:33 Download gff for
FMO07240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS33-RA | 118..456 | 9..347 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:44:10 Download gff for
FMO07240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS33-RA | 114..452 | 9..347 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:07 Download gff for
FMO07240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS33-RA | 118..456 | 9..347 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:07 Download gff for
FMO07240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16436080..16436298 | 129..347 | 100 | <- | Minus |
| 3R | 16436361..16436480 | 9..128 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:33 Download gff for
FMO07240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12261802..12262020 | 129..347 | 100 | <- | Minus |
| arm_3R | 12262083..12262202 | 9..128 | 100 | | Minus |
