FMO07246.5prime Sequence
851 bp (851 high quality bases) assembled on 2008-10-06
> FMO07246.5prime
CAGTCGACATGACTGATGTGGAGCCATCGCCCTACGGCGACTGCAAATTC
GTCGCTCGAGTGGAGCACATCAAGACCTTCATCCAGGCCATCAAGTCAAT
CTGCTTTAATGATTATGGGATGGTGCAAGTCTCCGAAGATGGTCTGCGCA
TCACCGTGGAGCAGGGCAAGTCCATCCAGGCAACGCTTTTCATGCCGCCG
GGTGCCTTCATGGAGTTCCGTGTGCAGGACTTCCAGTGCTTCGGTGTGAA
AATGAATGTGCTGTCCGAGTGTCTCAGTCTCTTCGGATCCGCCGATTGCA
GCCTGCGAATGATGTACAGGGATAAGGGCGATCCCCTGAAGATAATTCTG
TATCCGCACGACGACGATGATGTGAGCACGGAGTGCGCCATCAAAACCAT
GGACTGCGATGAGCCCATTGACTACGATCAGAATCTGAAGGATCCGGATC
TTAATGTTATTTTCGTACGCGGACCGAACCTATCGAAGGTGTTCAATGAG
CTGGAGAAGTCCGCGGAGGAGTTCGAGTTCGTTACATCGCCGAACCGCCC
GCACTTTAAGATCACCACAGTGGGGATCATGCAGGCGGTGTTCAGCGTCG
AAGTGGCAAAGACGAGTCCCATGATGATGATGTTTAACTGCAAACAGACG
GTGGTGGCTCGCTACAAGAGCCAGCAGATCCGCATGACCAACAAAGGCGA
TGCAGTCGGGCCACCAAGGTGGCCATTAAAACGAACTCCCGTTGGCCTCC
TAGAACTGCATCTGGTAATGCAGGGCGATAGCCAGGAGGAGATATTCATT
CAGTTCTTCATAATTCCTTTGCTCAACACTGATGCAAGCTTTCTAGACCA
T
FMO07246.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:39:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rad1-RA | 1484 | CG3240-RA | 613..1434 | 9..833 | 4035 | 99.5 | Plus |
| CG34314-RA | 1484 | CG34314-RA | 613..1434 | 9..833 | 4035 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:39:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2573486..2574202 | 833..114 | 3435 | 99.4 | Minus |
| 2L | 23513712 | 2L | 2574276..2574380 | 113..9 | 525 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:39:12 has no hits.
FMO07246.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:34:43 Download gff for
FMO07246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rad1-RA | 613..1437 | 9..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:43:55 Download gff for
FMO07246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34314-RA | 641..1465 | 9..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:49 Download gff for
FMO07246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34314-RA | 613..1437 | 9..837 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:49 Download gff for
FMO07246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2573488..2574202 | 114..831 | 99 | <- | Minus |
| 2L | 2574276..2574380 | 9..113 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:34:43 Download gff for
FMO07246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2573488..2574202 | 114..831 | 99 | <- | Minus |
| arm_2L | 2574276..2574380 | 9..113 | 100 | | Minus |
