FMO07250.5prime Sequence
824 bp (824 high quality bases) assembled on 2008-10-06
> FMO07250.5prime
CAGTCGACATGAAGAAGCGACGCATAACCAGCACAGCTGGAGATGCCAAT
GGACCTGGCGTTGGACCAAAAGCACGGACTTCAACTCGCTGGCGCTTCCG
CATTGCGTTGCGAAGAGAGGCACGCTTCGGCCAGGCGGTGCGGCAACTCA
AAGATTTGTTGCCACTGTTGGCGCTAATTGCTGGATGCGGAATGATCGGT
GCATGCGCAGCGGTTGGCTACTCCTATGCAAGATTCGAGGGTCCGGTGGT
GGGGCCGGAGCATCTGGTCACCGTCCACGACGGACGCACCGTGGACTATG
TGGCCCGTCCCGAGTACAGCTTCGCCTATGGAGTCGAGGATGGCAAGACG
CGCGTGCTGCAGAATCGCAAGGAGACGCGCAACGGGGACGAGGTGAGAGG
AGTGTACAGCGTAGTCGATCCGGATGGCACCTTGCGTGTGGTTAAATACA
CGGCCGACGATGCCAACGGCTTCCAAGCCGAGGTCATTACCAATGGTGTG
AAAACTCTGCACGGCCACGGTTCCGACGGGGATGCGGGTGGCGGGTCGGT
GGACAGCCAGGTGAGGCACCATAGCGCCGAGGCCCACAAAGCGAAGGAGG
ATGATGAGGAGGAGGATGAACGGGAGCGGGAGCACCAGGGGAATGGCCAG
TACCAAGTGCACGAGGATTACGATGAGGGAAAGGACGAGCAGGCGGAGGA
GGACGAGGAGGGTGGCGGTCACCAGGAGTACGAGGGCAGCAGCGAGGAAG
GATATGTCGAGGCAGATGCTCACAGTCAGCAGGAGGAGTCCAGTGACGAG
GACTACGCAAGCTTTTTAGACCAT
FMO07250.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13670-RA | 960 | CG13670-RA | 74..871 | 9..806 | 3990 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8320836..8321236 | 9..409 | 2005 | 100 | Plus |
| 3L | 28110227 | 3L | 8321792..8322191 | 407..806 | 2000 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:08:35 has no hits.
FMO07250.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:45 Download gff for
FMO07250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13670-RA | 67..878 | 1..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:44:19 Download gff for
FMO07250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13670-RA | 67..878 | 1..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:51:22 Download gff for
FMO07250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13670-RA | 67..878 | 1..815 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:51:22 Download gff for
FMO07250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8321795..8322198 | 410..815 | 99 | | Plus |
| 3L | 8320829..8321236 | 1..409 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:17:45 Download gff for
FMO07250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8313929..8314336 | 1..409 | 99 | -> | Plus |
| arm_3L | 8314895..8315298 | 410..815 | 99 | | Plus |
