FMO07255.5prime Sequence
1204 bp (1015 high quality bases) assembled on 2008-10-06
> FMO07255.5prime
CAGTCGACATGATGTGGAAGGCTCTCCTGATCGCCGTTTTGGCGATTGCC
CACTGCCAGGCGGTACTGGAAACGGACGCCAACACCTTGGTTCTGCTGGA
CAACCTGGCCATCCGGGAAACCCACTCGATCTTCTTCAAATCGCTGCAGG
ATCGCGGATTTAAGCTCACCTACAAACTGGCGGATGACTCCAGCCTGCTG
CTGTCCAAATACGGTGAATATCTGTACAAGAACGTCATCATATTCGCACC
AAGTGTCGAGGAATTCGGCGGCGATGTGAGCGTGGAGCGTTTGGCCCAGT
TCGTCGACGATGGCGGCAATGTTCTGGTGGCGGGCAGCGAGAAATCCGGC
GACGCGCTAAGGGAATTCGCCTCCGAGTGCGGCTTCGAGCTGGACGAGGA
GAATGCGGCGGTCATTGACCATCTGCACTACGATGTTAGCGATGCTGGCG
AGCACACAACCATCCTGACCTCCGCCAAGAATCTTATACAGGCCGACACC
ATTGTGGGCAAGGCCAACAGGCAGGCGGATGCCGCACCGCTGCTCTATCG
CGGTACAGGACTGATTGCCGACAAGGAGAACCCGCTGGTACTCAAGCTGC
TGACCGCCGAGAGCACCGCCTATAGCTACAATCCCGAGGCAAGTGTCTCC
GACTATCCGCATGCCGTTGGCCGAGGCACGCTGCTAATCGCCGCCCTGCA
GGCGAGGAACAATGCCCGCGTAGTGTTCTCCGGCTCGCTGCTCTTCTTCT
CTGACGAGAGCTTCACAACGGCCGTGCAGTACGCACAGAGCGGTGTGTTC
CACAAGCTGGCCGGTATCGCGACGTGGCCGAGTCCATTAGCAAGTGGGTA
TTTGGAGAGACTGGCCGCTTGCGCGTGGCATCCGTGCACATCACAAGGAG
GGCGAGCTGCTGCCACCGGATCAGCGTACACATCACGATCCGGTCGTCTA
CACATCGGCATCGAGAGCTGGTGCAAGGCGAGTGGCGCGCTTTAAGCCAG
CGAAATTCACTGGAGTCGTTGCGCATCGATCCCTTCGTCGCACTTATCTG
AGCAACGACACGGGCGCTACAGGCCAATCAAATCCGACGTCTACGGGTTT
CAGTTCAGTGACTACATTCGTTGCTACCCACTGTACGCACCCAGGTTCGG
TGCCTCCTGACAACGTTCACGTAGCCTTATCCGAAGGCGAATTCTCTCTA
TCAT
FMO07255.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:39:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ost48-RA | 1513 | CG9022-RA | 85..1207 | 9..1107 | 4955 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:39:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9157317..9158216 | 1039..150 | 3930 | 98.1 | Minus |
| X | 23542271 | X | 9158290..9158431 | 150..9 | 710 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:39:27 has no hits.
FMO07255.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:34:51 Download gff for
FMO07255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ost48-RA | 85..1207 | 9..1107 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:44:37 Download gff for
FMO07255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ost48-RA | 81..1203 | 9..1107 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:55 Download gff for
FMO07255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ost48-RA | 85..1207 | 9..1107 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:55 Download gff for
FMO07255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9158290..9158431 | 9..150 | 100 | | Minus |
| X | 9157235..9158215 | 151..1107 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:34:51 Download gff for
FMO07255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9051268..9052248 | 151..1107 | 97 | <- | Minus |
| arm_X | 9052323..9052464 | 9..150 | 100 | | Minus |
