FMO07258.5prime Sequence
940 bp (940 high quality bases) assembled on 2008-10-06
> FMO07258.5prime
CAGTCGACATGGAAATGGACGTCAATCGCCCGACCGGCCGCCATGGCAAC
CTAATGACCATATCCGCCCGCTGCTCCAACAACAATGCAGCCGAAGCCGG
AGCCGGAGTTGGAGCCACCAGGACTCCGGCCGCCGGAAGTGAGGCGCCGC
CCAGCGGCTGCTGCGGCATCTTGGGCCGCCTCCTCTGCGTGAGTCGCCAC
AAGGCCACGCAATCGGTGGCGGGCAGCGATCCCTTCTCCCAGCTGCAGTT
GCAGCGCAAGGGAGTCGCCACACCTGCTGCCGTTTCCGGACAGCGACGCC
GCCGGACGCCGCAGGAAATCTACTTCGAGAGTCGCGGCAAGTCCTGCAAG
AAGCTGCTTAAATTCAATGGCAATTCCAACAAGATACTGCTGTATCCCGA
GGAGGGCTGGGCGAGGACCGCCTCATCCAGTTACTGGACCATCACGCCCT
GCTTCTGGCAGCCCAATCGCTGCCGCATCGTCGAGTGCTCCGGAACCCAA
CGGCGCGCGACGAAAGCCCGGATGCTGCCGCTGGAGCAGCAGGGATCCCT
CCTGATTGCCGGACACTTTCGCCGGACGACGGCGGGGGGCGGAGGAGCTG
CATCGCCAGCGGGGGGCGGGGCATCGGGCAACGGTTCGGTGGCTGCCACG
CCCACGCCCGCAATACCTGCCGATGCAATCCGGACGGGGTCAACGGGCTG
TGACAAGTCGCAGCCCGCGTGGAACGACGAGTTCAAGCTGTATCTGACGT
CGAACATCTCGATGGAGGACTACAACATGGGCTACTGCCTCACCGGATTC
GTGGAGCGCCGCTGCCAGGTGACCAACACCTTCCAGATGACTCACTTTGC
GGTCATCAAGCGCCAGTGGGCAACCGTCGCCGTCAACCTGGGCAACTCCG
CAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCAAGTA
FMO07258.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30419-RA | 3812 | CG30419-RA | 341..1233 | 7..899 | 4405 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24215070..24215587 | 899..382 | 2480 | 99.4 | Minus |
| 2R | 25286936 | 2R | 24229079..24229455 | 383..7 | 1885 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:15:47 has no hits.
FMO07258.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:07 Download gff for
FMO07258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30419-RA | 334..1237 | 1..904 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:21:09 Download gff for
FMO07258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30419-RA | 330..1232 | 1..903 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:35 Download gff for
FMO07258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30419-RA | 334..1237 | 1..904 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:35 Download gff for
FMO07258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24215062..24215585 | 384..905 | 98 | <- | Minus |
| 2R | 24229079..24229460 | 1..383 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:07 Download gff for
FMO07258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20102585..20103108 | 384..905 | 98 | <- | Minus |
| arm_2R | 20116602..20116983 | 1..383 | 99 | | Minus |
