FMO07261.5prime Sequence
1198 bp (1028 high quality bases) assembled on 2008-10-06
> FMO07261.5prime
CAGTCGACATGTTGCCGCATCATCAGCGCCATAAAATGGCGACTTTGGCG
GACAGCGCCATTTGTTTCCTGCTCCTTTCGCTCCTGCTAATTGGCGCCTG
CCTGGTCACGCCCACCGAAGGACGCGCCAAAGATGACCGGCGCACCAGGG
GGCGTGGCAGCAGCAGTGGCGTCCTCTCGTCCTCCTCCAGCAGCAGCAAC
AACATGAACAATGGCTACTATAGTGGCTCCTCGTCGACAGCGGGCTCCTC
CTCCGGCTATGTGTTCACCAGCAGTAGTGCGGTGAACTCGGGAAGCACTG
GCTATAGCGGACCGATGGACAGCACTGGATTTTGCACCCGGCGGCGTGAC
ATGAAGCTAATGTGCTACTGTACCCCGGATGAGAACCACGTGCCAGTGCA
GAAGGCCGAGTGCTGGGTGTTCTCCGAGGGATTGCATCAGAATGACACCA
CCTGGACGCGATTCTATCAGCAGAAGCGTTTGCGGGAACTGAAGTTTGTG
ATCCAAAACAATGCCCGATTGGACTATATACCCACCATGATAATTGAACC
GCTGAAGAACCTGAGCAGCATTGTGATTGAATACTCGCAGGTGGAGATTG
TCAAGAGCTATGCGTTCGCAAATCTGCCCTTTTTGGAAAGGATTATCTTG
AACAACAATCACATAATGGCCCTCGACCAGGATGCCTTCGCCAATCACAT
TAGGCTGAGGGAGTTGAACCTGGAGCACAACCAGATCTTCGAGATGGATC
GCTATGCATTCCGTAATTTGCCACTTTGCGAACGGCTCTTCCTGAATAAC
AACAATATCAGCACTCTGCACGAGGGTCTATTCGCTGATATGGCCAGGCT
AACCTTCCTGAATCTGGCCCACAACCAGATCAATGTGCTGACCAGCGAGA
TTTTCCGAGGACTGGGCAATCTAATGTGCTGAGCTGACCCGGAATATTTG
AACTTTATCGGCGATACTGTCTTGCGATTGTGAGCCTGGATTGAGCTGGA
CTAGACGATAATCGCATTGGAGCGCATTTCCGAGCGCGCTCTGATGCCTG
ATACACTGAAAACTGAATCTGGAACATCTGCTTGAAAGAATCGACATGGC
TGCTGACGGGAACCCCGCCTGTCTGTCCCTAACGTCAGCTACAATTGAAC
CCTGACGTTTCACCATTCAGCCATGTGGCCATTGTGCACGGACCACGC
FMO07261.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Con-RB | 5588 | CG7503-RB | 998..2126 | 4..1116 | 5040 | 97.5 | Plus |
| Con-RA | 3758 | CG7503-RA | 467..1595 | 4..1116 | 5040 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4955878..4956850 | 973..4 | 4700 | 99.6 | Minus |
Blast to na_te.dros performed 2014-11-28 20:33:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3241..3317 | 136..211 | 112 | 62.3 | Plus |
FMO07261.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:53 Download gff for
FMO07261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Con-RA | 463..1559 | 1..1082 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:44:55 Download gff for
FMO07261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Con-RA | 459..1555 | 1..1082 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:34 Download gff for
FMO07261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Con-RA | 463..1559 | 1..1082 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:34 Download gff for
FMO07261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4955826..4956851 | 1..1022 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:53 Download gff for
FMO07261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4955826..4956851 | 1..1022 | 98 | | Minus |
