FMO07264.5prime Sequence
1239 bp (968 high quality bases) assembled on 2008-10-06
> FMO07264.5prime
CAGTCGACATGATACCTATTCTGGAGAAACTCAGCGGGTTCTACAACACC
TACGTCTTGGCCGTACTCACCATTGGTTATATCCTGGGCGAATTGGGTCA
CTATCTGATCGGAGTGACCTCCAAGCAGACGGCCATTGAGTTGGACTACG
GTGATCATGCCTGCCAGCAGAACACCTCGATGTTCAATCGCCACGAGTTG
CCCACCCAGTGCTCGGCGGTTATGAATGAGACCAGCTGCTATGCCCTTGA
TTTCAACGGCACTGGCTATTGCGAGTGGAACTACAATGGACTGGGCATCG
ACTACCAGATCCTGGCCGGACCCACCTTCATCCTGATTTTCACCATCGCC
GGCGTATTTATGGGCTTCGCAGCGGACAAGTACAATCGCGTCAACATGCT
GACTGTGTGCACAGTGATCTTCGGCATTGCCATGATTCTGCAGGGCACCG
TTAAGGAATACTGGCAGCTGGTAATTTTGCGTATGATCATGGCAGCCGGC
GAGTCGGGTTGCAATCCCTTGGCCACGGGCATTATGTCCGATATCTTTCC
GGAGGATAAGAGAGCACTAGTCATGGCCATCTTCAACTGGGGAATTTATG
GAGGATATGGAATCGCCTTCCCCGTGGGTCGCTACATCACCAAGCTGAAT
TTCTGGAATCTGGGATGGCGCGTTTGCTACTTGGGCGCCGGTGTCCTTAC
CGTAATTATGGCCGCACTGACCGGAACCACTTTGCGGGAGCCGGAGCGCA
AGGCCATCGGTGAGGGTGACCGCCAGACGTCTAGCGGCAAACCAGTGAGC
CTGTGGCAAGTTATCAAGAATCCGGCAATGATCATGTTGATGATTGCCGC
GTCCATCCGTCACTGCGGTGGCATGACCTTTGCCTACAACGCCGATCTCT
ACTACACAACGTACTTCCCCGACGTTGACTTGGGCTGGTGCTCCTTTGGG
GTCACCATTGGCATTGGCAGCGGTGGGTGTGGTCGTCGTGGCATTGGTGT
CGGACAAGATGTCCCAGATGGGCATTCGATCCCGCGCCTTTTGTATTGGC
TTGTTAGCAGCTAATTGCCCACTACAGCCTCGGGATCGGGCTACTTTGAC
CCGCCTGGGGACATGAATACCCCTGGCCTAGTTATTTCTTCCCCGAGAGG
GATTCGAATTGCCTTTGCATGATGGAATGTTCGCGTGCGCTTCCCTCCTC
ACACATGTGCCCCCTCCCTGGTGGTAGAGGAACAACAAA
FMO07264.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14439-RC | 2296 | CG14439-RC | 380..1523 | 9..1148 | 5140 | 97.4 | Plus |
| CG14439-RB | 2428 | CG14439-RB | 512..1655 | 9..1148 | 5140 | 97.4 | Plus |
| CG14439-RA | 2096 | CG14439-RA | 180..1323 | 9..1148 | 5140 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6753776..6754919 | 9..1148 | 4890 | 96.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:33:52 has no hits.
FMO07264.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:56 Download gff for
FMO07264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14439-RA | 180..1338 | 9..1161 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:44:59 Download gff for
FMO07264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14439-RA | 175..1333 | 9..1161 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:36 Download gff for
FMO07264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14439-RA | 180..1338 | 9..1161 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:36 Download gff for
FMO07264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6753776..6754934 | 9..1161 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:56 Download gff for
FMO07264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6647809..6648967 | 9..1161 | 97 | | Plus |
