Clone FMO07272 Report

Search the DGRC for FMO07272

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:72
Well:72
Vector:pMK33-CFH-BD
Associated Gene/TranscriptfliI-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07272.5prime Sequence

1207 bp (1043 high quality bases) assembled on 2008-10-06

> FMO07272.5prime
CAGTCGACATGAGCGTGCTGCCGTTTGTGCGCGGTGTGGACTTTACGAAA
AATGATTTCAGCGCAACATTCCCCAGCTCCATGCGGCAGATGTCGCGGGT
GCAGTGGCTCACACTGGATCGCACGCAGCTGGCGGAGATTCCCGAGGAGC
TAGGCCACCTACAGAAGCTGGAGCACCTGTCGCTGAACCACAACCGACTG
GAGAAGATCTTTGGCGAGCTGACAGAGCTGTCCTGCCTGCGATCCCTCGA
CCTGCGGCACAATCAGCTGAAGAACAGCGGCATACCGCCGGAGCTGTTTC
ACCTGGAGGAGCTGACCACGCTGGACCTGTCGCACAACAAACTGAAGGAG
GTGCCCGAGGGTTTGGAGCGGGCCAAGAACCTGATAGTCCTCAACCTGAG
CAACAATCAGATCGAGAGCATACCCACGCCGCTGTTCATCCATCTAACGG
ATCTGCTGTTCCTGGATCTGTCGCACAATAGACTGGAGACACTGCCGCCG
CAGACGCGACGTCTGATTAATCTGAAAACCCTGGACCTATCGCACAATCC
GCTGGAGCTGTTTCAACTGCGGCAATTGCCCTCGCTGCAGAGCTTGGAGG
TCCTGAAGATGAGCGGCACGCAGCGCACGCTCCTCAATTTTCCCACTAGC
ATAGACAGTTTGGCCAATCTCTGCGAACTGGACCTGTCGCACAATTCGCT
GCCCAAGCTGCCAGACTGCGTCTACAATGTGGTCACTTTGGTGCGACTGA
ATCTGAGCGACAACGAGCTAACCGAACTGACTGCCGGTGTAGAGCTTTGG
CAGCGTCTGGAGTCGCTGAATCTGTCGCGGAATCAATTGGTTGCGCTGCC
GGCTGCCCTCTGCAAACTACCAAAGCTGCGACGATTGCTGGTGAACGACA
ATAAGCTAACTTCGAGGGCATCCCCTCGGGCATCGGCAAACTCGGAGCTC
TGGAGGTGTTTTCGGCAGCCACAACCTGCTGAAATGGTGCCAGAGGGACT
CTGCCGATGCGGTGCTTTGAGCAGCTCACCTGAGCTGCAATCGGCCTATA
CCCTGCCGATGCATTCACTGCTGGAGGGCTAGAACAGTTGACTGCCCACA
ATTCGGGAGCTTATGAGCCGCCCAAGCCAAGGTAGCGAGTAAGCCCCAGC
TTGGATTCACACTAGAGTTAGTCTGCGAACTCGACCTTCGGTTATCCTGG
GCATGCT

FMO07272.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:50
Subject Length Description Subject Range Query Range Score Percent Strand
fliI-RA 4827 CG1484-RA 154..1359 9..1194 5230 96.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21340111..21341103 63..1050 4685 99.3 Plus
X 23542271 X 21339894..21339948 9..63 275 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:49:49 has no hits.

FMO07272.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:45 Download gff for FMO07272.5prime
Subject Subject Range Query Range Percent Splice Strand
fliI-RA 146..1315 1..1153 97   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:44:54 Download gff for FMO07272.5prime
Subject Subject Range Query Range Percent Splice Strand
fliI-RA 91..1260 1..1153 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:30:43 Download gff for FMO07272.5prime
Subject Subject Range Query Range Percent Splice Strand
fliI-RA 146..1315 1..1153 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:30:43 Download gff for FMO07272.5prime
Subject Subject Range Query Range Percent Splice Strand
X 21339886..21339947 1..62 93 -> Plus
X 21340111..21341218 63..1153 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:45 Download gff for FMO07272.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 21210913..21210974 1..62 93 -> Plus
arm_X 21211138..21212245 63..1153 97   Plus