FMO07277.5prime Sequence
1208 bp (1010 high quality bases) assembled on 2008-10-06
> FMO07277.5prime
CAGTCGACATGGCCAACGCTGTGGTGGTGTTGGACAACGGAGCGCATACG
GCGAAAGTGGGCCTGGCCAATCAGGATGAGCCCCATGTGGTGCCCAACTG
CATCATGAAAGCAAAGAGCGAGCGGCGACGCGCTTTTGTGGGAAATCAGA
TAGATGAATGCCGGGACACATCGGCGCTCTATTACATTCTGGCGTTCCAG
CGCGGCTACCTGCTCAACTGGCACACACAGAAAACGGTGTGGGATTACAT
ATTCAGCAAGGACGGCATTGGTTGTTCGCTGGAGAACCGCAATATTGTCA
TCACTGAGCCGCAGATGAACTTCCAGAGCATCCAGGAGGCAACGCTGGAG
ATTCTGTTTGAGGAGTACAAGGTTGATGGGGTGTACAAGACCACTGCTGC
CGATCTGGCTGCCTTTAACTATGTGGCTGACAGCGAGGAGCGGACTACAA
TGGAATCGCTTAACTGCATCATCATCGATGTAGGCTACAGTTTCACCCAC
GTTGTTCCTTTTGTGCTGGGACGGCGCGTTCTCCAAGGCATACGACGCAT
CGACATGGGCGGGAAGGCGCTGACCAACCAGCTAAAGGAGCTAATCTCTT
ATCGCCACCTAAACGTCATGGACGAGAGTCATGTAGTTAACCAGATCAAG
GAAGATGTCTGCTTTGTGGCGGAGGACTTCAAGCAGGCGATGCAGGTGCA
TTATTCGGAGGAGAAGCGACGCGAAGTCACAGTTGATTATGTCCTTCCAG
ACTTCACCACCGTCAAACGGGGCTATGTTCGTGTTCCCGGAAAGCCGCGC
GAGGATGAGGAGCAACAGCAAATGGTGTCGCTGTGCAATGAACGTTTCAC
CGTGCCCGAGCTGCTCTTCAATCCCTCGGACATTGGTGTGCAACAGTGGG
CATTCCGGAAGCGGTGGCCGATTGTCTGAGGCTTGCCCCTGGAGCGCACC
GCGAACTCCTGCTCACATCCTTATTGTGGCCGCAGTGCCCAGTTTCCGGA
TTTCTGCCGCGCCTAAAGCGCGATTTACGTGCCCTGTGCCCGACGATCTG
AAGGTCACTCATCTGTCCGGAGATCCGTGCGGTACGCGTGTACGCGGCAG
GAGGTTGCACCAGCCCACTTTGAGTTGTTACCCTAACCGCACAGATCGGT
TCCAGGATACACACGGCAGCTTCTATACCACTCTTGGGCCCGCGGCCCGA
ATAGAGTT
FMO07277.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Arp6-RA | 1347 | CG11678-RA | 88..1220 | 9..1123 | 5205 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15735960..15737033 | 1072..9 | 4875 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:50:25 has no hits.
FMO07277.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:05 Download gff for
FMO07277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arp6-RA | 85..1220 | 2..1123 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:45:20 Download gff for
FMO07277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Actr13E-RA | 41..1176 | 2..1123 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:31:04 Download gff for
FMO07277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arp6-RA | 85..1220 | 2..1123 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:31:04 Download gff for
FMO07277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15735901..15737036 | 2..1123 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:05 Download gff for
FMO07277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15629934..15631069 | 2..1123 | 97 | | Minus |
