FMO07279.5prime Sequence
1222 bp (1044 high quality bases) assembled on 2008-10-06
> FMO07279.5prime
CAGTCGACATGGACATCGACTGGCAAAACGGCCTCACCGAGCTGAAGGAT
CGGGGCCAGTACCTGCTCCACTCGGAGAAGTGGGCCGACTGCCGCTTTCT
GGTGGGTTCTTCGCCCACCCAGCGGCTCATTGCCGGCCACAAGCTGCTAC
TGGCCATGGCTTCGCCGGTGTTCGAGCGAATGTTCTATGGCAACCTGCCC
GATAAGACGGACCCCATCGTCATTCCGGACGTGCAGCCGGAGGCGTTCGA
GGCGATGCTGGAGTACATCTACACGGACCGCATCACCATTGGGTCCTTCG
ACAAGGCCTGCGAGCTGTGCTACGTGGCCAAGAAGTACATGCTGCCCCAC
GTGGTCACGCGCTGCACCCATTTCCTTTGGGCTGATCTTAGTCCGAAAAA
CGCGTGCCGGGCGTACGAGTTTGCCAAGCTGTTCGATGAGCCGCGCCTCA
TGCAAAGCAGCATGGATCTGATCGCGGCCAACACGCGCGAGGTTCTGTCC
GATCCCAGCTTCCTGGACATCGAGGTCTCCACCCTGATGGCCATTCTTGA
CCAGAATCGCCTGAACATCGACTCCGAGCTGGATTTGTTCAACTGCCTGC
TGAAGTTTGCCAGTGAGCGGGGCATCCTGAACGAGTCCGGCCAGGAAGAG
ACTGCTAGCGGAGGTCAGGTGCTGACCAAGGAATCGCCCGACAATGCTGC
CGGCCATGTGCTGGTCGAAGAGATCAAGATGGAGCCCGATGTGGCGGCCA
TGGTGCAGCACATGCACCAGGACGACGAGGCTGACAGCTTCGAAACGGAC
GCTGGGATGGCTTCCACTTCCTCTGCGGCTGCCGCGGCTGCAGCTGCGCC
CACGGCTGCCTCCCCGCCGCTGGACGTGGCTTCCGGCTCCGACGACCTGG
TAATCATCGATAGCGACGCTTCGGCCGATGCCGCCGCCAACATGATTACA
TCATGGACGCCCAGCGCACATTCTCGATGGCGCATGCTCAGGCAGGCGGT
CAAAGGATTCGCTTTCTCACATGACGCCGCAGCAGTTCGCGGAGGACCGT
CGTTCAGCTGCTGCAGCAGCCCGAGGCCCTCTCATCTGATAAGATCTCAG
TCCCTCGCTCTACCGATGTTCCAATGCGAGCTTCTGCGGTCCGGAAACGG
CACTTCAGATCGACGGAAGCGAAGAATTTCTCTTCTGTATTGGCACTGGG
ACGCCTCTCTCTGGGGCTTCGG
FMO07279.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17068-RA | 2785 | CG17068-RA | 141..1256 | 9..1110 | 5205 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20249869..20250953 | 1083..9 | 4950 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:50:41 has no hits.
FMO07279.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:17 Download gff for
FMO07279.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17068-RA | 135..1262 | 1..1117 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:45:22 Download gff for
FMO07279.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17068-RA | 484..1611 | 1..1117 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:31:14 Download gff for
FMO07279.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17068-RA | 135..1262 | 1..1117 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:31:14 Download gff for
FMO07279.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20249832..20250959 | 1..1117 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:17 Download gff for
FMO07279.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20120906..20122033 | 1..1117 | 98 | | Minus |
