FMO07283.5prime Sequence
878 bp (878 high quality bases) assembled on 2008-10-06
> FMO07283.5prime
CAGTCGACATGTCCAAGGCCTTGAACAATCCCGGTGGCAACGGAGGAGGC
GGTGGCCCCCATCGGGACTATGGTGCGATGGCCGATTCAACGCCCGAAGT
GAGCTTTGCGGCAGCCGGCGGTTCGTCCGGCTTCAGTCCGACGGAATTCA
TGTCTCTTAGTGAGGACATTGGCCACAACATCACTGCCATCCACAGCAGC
ACCAAGCAGTTGGAGAAGCAGCTGAAACTGATTGGCACATCCAAGGAGCA
GCCAAATCTGCGGGAGAAGGTGCACACCATCAACACCAAGTGCAATGCCC
GGGTGCAGACCACCAGTCAGGACTTGCAGAGGCTACAGGCCGTTGTGCGG
CACGGAGATCGCCAGCAGAAGCTGCAGCTGGAGAAGCTCACCCGGGAGTT
CCATGGCGTGGTGGAGAAGTACTCCAATCTGCAGCGACGCATCTCATCGG
CCATGCGGCAGACCCTGCAGCAGGCGCAGCAATTTGCCGATCAGGTGGTG
GAGACCAACGCCCGTGCTGAGCTGCTGCAGCAACAGCGCTTGGAGCAGGC
CCATCTCCAGCAGGAGCACGACATGCTCGACGATCGGCGGCGGCAGGTCG
AGCAAATAGAGTCGGACATCATCGATGTCAACCAGATCATGACCCAGCTG
AGTGGACTGGTGCACGATCAGGGGCAGCAGATGGATTTCATCGAGAACAG
TATTGAGCAGACGGCCGCCAACGTTGAGGATGGCACCTCGGAACTGGCCA
AGGCGGCCAGGAGTCGCCAGAGCTACCGGCGCAAGATCTTGATACTCCTG
GTGATCGCTGTGATAATAGGTTTAATCGTAACTGGCGTTATCGTAGCCAA
ACTGAACAGTGCAAGCTTTCTAGACCAT
FMO07283.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Syx13-RB | 1568 | CG11278-RB | 215..1066 | 9..860 | 4245 | 99.9 | Plus |
| Syx13-RA | 1488 | CG11278-RA | 135..986 | 9..860 | 4245 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13044920..13045595 | 9..684 | 3380 | 100 | Plus |
| 3L | 28110227 | 3L | 13046216..13046392 | 684..860 | 870 | 99.4 | Plus |
Blast to na_te.dros performed 2014-11-28 23:08:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6739..6898 | 455..611 | 134 | 56.2 | Plus |
FMO07283.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:50 Download gff for
FMO07283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx13-RA | 135..991 | 9..868 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:45:14 Download gff for
FMO07283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx13-RA | 133..989 | 9..868 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:51:25 Download gff for
FMO07283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx13-RA | 135..991 | 9..868 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:51:25 Download gff for
FMO07283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13044915..13045595 | 1..684 | 99 | -> | Plus |
| 3L | 13046217..13046397 | 685..868 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:17:50 Download gff for
FMO07283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13038015..13038695 | 1..684 | 99 | -> | Plus |
| arm_3L | 13039317..13039497 | 685..868 | 97 | | Plus |
