FMO07287.5prime Sequence
1214 bp (1000 high quality bases) assembled on 2008-10-06
> FMO07287.5prime
CAGTCGACATGCCAAAAGAAGATTGCAAATACTGGGATAAGTGCTATCAG
CAGAATCCCGCACATTTGTCCAAATACAATCATCCGAAAAAGCAACAAGA
ACACGAAGTGGACGGCGCAGAAGGCAAAAAAGTGGCGCCAAAAAGAAGTG
CATCCTCGCAGTCTGGTGAACAGAAAAAGGAAGAACAAACGGAGCCGGTG
AACAAGGATAAGTCCAATACGAGTGCTTCAAGTACGGAGATGGTGAACAA
GGATACAGCCAAGGGCAGTTATGAAGCCGAAACCGAGGAGCTTCACAAAG
AGGCCATGAGCAACATATCCGGAAAGAACTACATGGAGATCTTGGAGAAG
CGCATCCGCCTGTCCGTGCAGAAGGAGTACGACAATCTCTGCGAGTCCAA
CGAGTTCATTCGACACAAGTTCCTTGTCGAAATGCCGCCGGACTTCTACG
AATTTTGGAAGTTTGTGGGAAGCTTAAAAATTGATCCTGCGAAGCCCAAG
GATGCTGGCTTGGAGCACCTAGACAAAGTATTTCAACTGCAGTTGGTGGG
TCCCTTTGAGTTCCTAGCCGGTAAATTTCACGGCGCCAAACTAGGCGAAC
CGGGAGACTACCTGCGCCACTGGCGTTTTTACTACGATCCACCAGAATTT
CAGACGATCTTCGTGCGCCGAGGCACTGGGATTCACTACGGTTACTGGCG
CGATGTGCCGCAAGACAAGGAAAATCTCTTAATAGCCCGCAACGACTCTG
CGAAAGGCTGCCAGTTCCAATTCGTCGCTGGAAATGCCTTCGATGCTTTC
CTCTACTACCTGGAGCACGATTTTGCGGCCACTCCGTCTCATGCGGGCAG
TTGGCGGGACCAAAAGGCGGTGGCAAAATACCTGAGTGACATTCCCTAGA
ACTGGCCCAGCTGGACCGACTGCAGCGGGAGCGCAACAGCGTGTTGTGGC
AGACATTCCACCGAGCCGCATTGTTGTGCCCTTGACAGAAGACAGAAGTG
GATACCGCCCGCTGGCTGTCAGCGATTCGAACTCAAGAAGATGCTGCATG
CTTGAACGGAGACGTCGAAATGGACGCAAGCAGGCGGTTCTTGAAGCCGC
ACCGGTGTCCAGCATCAACATTACATGATAGAATTCGAACTAGAAGTCTT
GAACTTGAATCCGAATGTTCCGCATGGACAAAGAACGTCCATGTCTTGCC
CTACTCGTTTCCTG
FMO07287.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1218-RA | 1505 | CG1218-RA | 95..1220 | 9..1111 | 5020 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5791973..5793022 | 9..1046 | 4680 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:34:05 has no hits.
FMO07287.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:05 Download gff for
FMO07287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1218-RA | 93..1209 | 6..1101 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:45:42 Download gff for
FMO07287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1218-RA | 86..1202 | 6..1101 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:47 Download gff for
FMO07287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1218-RA | 93..1209 | 6..1101 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:47 Download gff for
FMO07287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5791971..5793087 | 6..1101 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:05 Download gff for
FMO07287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1617693..1618809 | 6..1101 | 97 | | Plus |
