FMO07290.5prime Sequence
966 bp (966 high quality bases) assembled on 2008-10-06
> FMO07290.5prime
CAGTCGACATGCAGGAGGCCTACGTCAACATCAACTCCATTCCCACCCAC
ATATTCACATGGGGCAGGTGGATTGAGGAGACCATAACCGAGAAGGAGAT
CGTCATCTGCATAACTGGCAATCCCGGTTTGCCAGGTTTCTACACAGAGT
TCGCAGGCACTTTGCAAAAGGAGTTGGGCGATCTTCCAGTTTGGGTGATA
GGGCACGCTGGCCATGATGATCCGCCAGAGGCCAGTATTCGGGAGGTTCC
TCAACTCAGCGGCAACGAGGAGCTCTTCAATTTGGACGGACAAATCCGGC
ATAAAATCGCCTTCATCGAGAAATACGTGCCAAGTGATGTCAAGATCCAC
TTGATTGGGCACTCCATCGGAGCGTGGATGATCCTGCAGCTGCTGGAAAA
CGAGCGGATACGGAGTCGCATCCAAAAGTGCTATATGCTGTTCCCCACCG
TCGAGCGGATGATGGAGTCGCCCAATGGATGGGTGTTCACCAAGGTGGCC
ATGCCCCTGTACTCCGTGTTTGGCTACATTTTCTTCAGCTTCTTCAACTT
TCTGCCCGTGTGGTTGCGCCTGATGCTGATACAGATCTACTTCTTGATTT
TCTCCATTCCACGACAGTTTCTGGGCACCGCCCTAAAGTACTCCAAACCA
TCGGTAGCGGAGAAGGTGGTCTTCCTGGCCGACGATGAGATGGCCAGGGT
TCGCGGGATTCAAAGGGAGATTGTAGAGCAGAACCTGGACCTCCTCAAGT
TTTACTACGGCACTACCGACGGATGGGTACCAATCTCCTACTATGACCAG
CTCAAAAAAGACTACCCCAAGGTGGACGCCCAGCTGGACACCAAGAAGAT
CGACCACGCTTTCGTCCTGCGCCACTCGCAGCCTATGGCTGTAATCGTAG
AGACATGATCCAGCAGCACAGACGTGTAGCAGCTTTCTAGACATTCGTTT
GGCGCGCGGCCCAGGT
FMO07290.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9186-RA | 1428 | CG9186-RA | 294..1213 | 9..927 | 4575 | 99.9 | Plus |
| CG9186-RB | 1466 | CG9186-RB | 332..1251 | 9..927 | 4575 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1311934..1312662 | 927..200 | 3595 | 99.9 | Minus |
| 3L | 28110227 | 3L | 1312719..1312912 | 202..9 | 970 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:29:50 has no hits.
FMO07290.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:57 Download gff for
FMO07290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9186-RB | 332..1257 | 9..932 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:45:54 Download gff for
FMO07290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9186-RA | 292..1217 | 9..932 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:50 Download gff for
FMO07290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9186-RB | 332..1257 | 9..932 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:50 Download gff for
FMO07290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1312720..1312912 | 9..201 | 100 | | Minus |
| 3L | 1311928..1312660 | 202..932 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:57 Download gff for
FMO07290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1311928..1312660 | 202..932 | 99 | <- | Minus |
| arm_3L | 1312720..1312912 | 9..201 | 100 | | Minus |
