FMO07292.5prime Sequence
1217 bp (1009 high quality bases) assembled on 2008-10-06
> FMO07292.5prime
CAGTCGACATGTTCGAACGCAACCAGAAGACCATCTTTGTGCTGGACCAC
ACCCGATACTTTAGCATCGCCAGCGAGGAGTACATCTCGATGGACTTCCT
AAAGGGAAAACCATCTGCAGACGGCGGCGCAACAGGAGCGGCGGGAAATG
CAACCGGCAGCGGTGGATCCCAATTCAGCAAGAGCCTGTGGACATGCGCC
TGCGAATCCTCCATCGAGTACTGCCGCGTGGTCTGGGATCTCTTTCCCGG
CAAAAAGCATGTGCGGTTTATTGTCTCGGACACGGCGGCGCATATCGTGA
ACACCTGGAGGCCCAGCACGCAAAATATGGCGCACGTGATGAACGCAATG
CTAATTGTGGGCGTGCCGTCGCGCAACGTACCCACATCTTCTGACTACTC
GGTAATCCATGGCCTGCGGGCCGCCATCGAAGCGCTGGCGGAGCCCACCG
ATGAGCAGTTGGCGGCAATGGCCGACTTTGGGACCGACGAACTGCCGCGC
ATTCCCAACAAGGGTCGCGTCATCTGCATAACTTCAGCGCGTGACAATAC
CAGCATGAAAAGCCTGGAGGACATCTTTAACACCGTGCTGGTGCAGCAGA
ACACCCTAGCAGCTCCGCCCTCCAAGAAGGGACTGGTCATCGACCATTGC
CACCTAGTTATCCTCAACATTGTGCCGCTGGGCGTTGAATCGTTGGTTAC
CAATCGCAGCCTGCTCAAGATATCGCCGCTGCTTGATGTCGAGATCCACA
CAGTCAGTGCCCCGGATATTTCCTATAAGCTGACGCACCTCATACTGAAC
CATTACGACCTAGCTAGTACCACGGTGACTAACATACCCATGAAAGAGGA
GCAGACGCCCACTCCAGCGCCAACTACGATGTGGAAATCCTGCACAGCCG
AGGGCCACTCCATCACCTGGTGGCCAGATTTCAGTCTACCCACGAGCATC
AAGCAAGTGCCACAATACGAACAGTGACTCTTAAGTGGTGCACACCGGCG
CGGTTGCGCTCTGCAGATCTACAGCCCTGTCTGGGTCAGTTCTCGTGACC
CGGTGACGTCACCTCGCGGCCAGTCTTGCTTGATAACTCTGCCTAACGGA
CGTTCAGTCTGGCTGGAAATGCCGGCAGACGTTAAGCCACAAGCTTTGCT
TCGCACGGGTGCGAATTTGTGACTCGTGGCATACGGCTCCTGATGAATAG
AGCACTCACTAAATACT
FMO07292.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| asun-RA | 2497 | CG6814-RA | 82..1210 | 8..1124 | 5175 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16264352..16265480 | 8..1124 | 4850 | 97.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:08:44 has no hits.
FMO07292.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:53 Download gff for
FMO07292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| asun-RA | 73..1218 | 1..1130 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:45:56 Download gff for
FMO07292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mat89Bb-RA | 176..1321 | 1..1130 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:51:26 Download gff for
FMO07292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| asun-RA | 73..1218 | 1..1130 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:51:26 Download gff for
FMO07292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16264343..16265488 | 1..1130 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:17:53 Download gff for
FMO07292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12090065..12091210 | 1..1130 | 97 | | Plus |
