FMO07302.5prime Sequence
927 bp (926 high quality bases) assembled on 2008-10-06
> FMO07302.5prime
CAGTCGACATGCCGGAAGAAGAGCCGCCACAAAAGCCCATGGAGGAGGAG
GAGGATGATGATCAGGAGCAGGATCAGGATCAGGACCACGAACAGGATCA
GCACGAACAGGATCAGCAGCCCCAGTTAGCGCAGGGCGAGATACCCGGTC
AGCAACTGCCTGAGCAACCCAACCCCGATGTGCAGCCGCAACAGCCGGCC
GAGTCTGTGGTGGTCACCGAATTATCCGCAGAAGAGATGCGCGCCCGTCG
TCTTCGGACTTTGGCTGCCCGAAGTGGCATCCAGTGTGCCCTGGCGCCCC
TGACTACTACGCCACGGAAGCCGACCAACGTCTCTGGCGAGTCTCGACTG
GTACGTGAGGCCACGCCCGGCGAAAAGGAGGTATCGCTGCCCACTTCGGC
GCCCGCTTGGAGGGAACTGAGCGGAAAACCGGACATGGATGTGGAGATGA
AGTCGGTGGTCTCGACACCAATGCAAGATGTGGATATGACGACAGCGCTC
AGCCTGCCAACAGCCGAGGCCACCAAAAGGAGTGTGTTGCAGAGTTGCAA
GATATCCGCTGGAAATGCCGAGTTGTCCATTGAAACTGTAGTCGGTCCAA
AAAAAAGTGCGGATGAGCAAAACGAACAATTGCTCTCCCGCCTACTGAAT
GCCACGTGGAATGAGTACGGTAGCGGGTCCATCATTTGTGCCCAGAGTGC
CAGCTTCCTGGAGCAGCAGCCACACCGCAGATTCGACTTCGAGTGCATTG
TGGCCAATGTGCTCATGGAGGCTGTTTTGAAGATCTACAACGGTGAGCTG
ATCGAAGGAGATGGCGTTTCTGTTAAAGCGGACGATAAAGAGTTCTCCTC
TGCCAAGAAATTAAATCAGATGATACGGAAGTACAGGAAATCCTTGCCAA
CGCAGTAGCCACCGGTGGAGCAACTGC
FMO07302.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9934-RB | 4357 | CG9934-RB | 477..1396 | 9..927 | 4575 | 99.9 | Plus |
| CG9934-RA | 4759 | CG9934-RA | 767..1686 | 9..927 | 4575 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13016970..13017663 | 927..235 | 3420 | 99.9 | Minus |
| 2L | 23513712 | 2L | 13017829..13018056 | 236..9 | 1140 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:40:48 has no hits.
FMO07302.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:08 Download gff for
FMO07302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9934-RA | 760..1686 | 1..927 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:46:02 Download gff for
FMO07302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9934-RA | 760..1686 | 1..927 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:25:21 Download gff for
FMO07302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9934-RA | 760..1686 | 1..927 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:25:21 Download gff for
FMO07302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13016970..13017661 | 237..927 | 99 | <- | Minus |
| 2L | 13017829..13018062 | 1..236 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:08 Download gff for
FMO07302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13017829..13018062 | 1..236 | 98 | | Minus |
| arm_2L | 13016970..13017661 | 237..927 | 99 | <- | Minus |
