FMO07305.5prime Sequence
1237 bp (1005 high quality bases) assembled on 2008-10-06
> FMO07305.5prime
CAGTCGACATGCCAGTCTCGGCGAAACGCTTACTTCGGAATTTTCAGTTC
ACCAGCTGCGATCGGAATGGCAAAATGTTGATTCACCTGCTGCTCATCGT
TTCGCTTCTGGAAGCAATTGGCGCCTTTCAGCCGGAGTTCGTGGAGAGCA
TTTCCAACGTGTCCGTGGCCGTCGGACGCGATGCAACCTTCACGTGTCAC
GTCCGACACTTGGGCGGCTATCGGGTGGGCTGGCTCAAGGCCGACACCAA
GGCCATTCAAGCCATCCACGAGAACGTAATCACGCACAATCCTCGCGTCA
CGGTCAGTCACTTGGACCAGAACACGTGGAATTTGCATATAAAGGCGGTT
TCCGAGGAGGATCGCGGCGGTTATATGTGCCAACTGAACACGGATCCGAT
GAAGAGTCAGATTGGCTTCCTGGACGTCGTGATTCCGCCGGACTTCATCA
GCGAGGACACCTCATCCGATGTGATTGTGCCGGAGGGCAGTTCCGTGCGA
TTGACATGTCGGGCTCGCGGTTATCCGGAACCGATTGTCACCTGGCGCCG
CGAAGATGGCAACGAAATTGTCCTGAAGGACAATGTGGGCACTAAGACCC
TAGCGCCCTCTTTTCGCGGCGAGGTGCTAAAGCTATCAAAGATCTCGAGG
AACGAGATGGGCTCCTATCTGTGCATCGCCTCCAACGGAGTACCGCCATC
GGTCTCAAAGCGCATCTCCCTCAGCATACACTTTCATCCGGTCATCCAAG
TGCCGAATCAATTAGTCGGCGCACCACTTGGCACTGATGTCCAAATCGAG
TGTCACGTCGAAGCCTCGCCCAAATCAATTAACTACTGGATTAAGGACAC
GGGTGAGATGATTGTGACATCGGGCAAGTATCATGTGCAGGAGAGCTCGC
AGTCCATGTACGAGACCAAAATGTCAATGATAGTCAAGAAGTTTCAAAAG
GATGATGTCCGGATCTTTCCGCTGCATTGCAAAAACTCACTCGGCGAAGT
CGACGCAGTATCCGTTTATACGAAATCCCCGGAACGATCGTAATTAAAAT
CCGCTGAACGGCGGCGAAAAGAAGGTGGAGGGCGAAGCCTGGATGCGATG
CATGACATTTGGAGCAAAACAACAGTTCAAGTTCACTATTCACGGAGGAA
CAAGAACTGCCAATCGATCGTCAGAATCCAGGCGAGGGGCCAGTCGAGCT
TGACCGCGTTATCTCCCCGATTATCTTCCACACCGGC
FMO07305.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:14:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32791-RC | 7668 | CG32791-RC | 246..1385 | 9..1137 | 5220 | 97.8 | Plus |
| CG32791-RA | 3576 | CG32791-RA | 246..1385 | 9..1137 | 5220 | 97.8 | Plus |
| CG32791-RB | 4540 | CG32791-RB | 1314..2349 | 113..1137 | 4700 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3523634..3523820 | 410..224 | 935 | 100 | Minus |
| X | 23542271 | X | 3514002..3514173 | 1022..852 | 655 | 96 | Minus |
| X | 23542271 | X | 3519825..3519955 | 732..602 | 655 | 100 | Minus |
| X | 23542271 | X | 3514866..3514987 | 854..733 | 610 | 100 | Minus |
| X | 23542271 | X | 3523920..3524033 | 226..113 | 570 | 100 | Minus |
| X | 23542271 | X | 3530315..3530420 | 114..9 | 530 | 100 | Minus |
| X | 23542271 | X | 3522211..3522314 | 512..409 | 520 | 100 | Minus |
| X | 23542271 | X | 3520042..3520134 | 603..511 | 465 | 100 | Minus |
| 3L | 28110227 | 3L | 5433780..5433839 | 657..716 | 195 | 88.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:14:45 has no hits.
FMO07305.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:48 Download gff for
FMO07305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32791-RA | 246..1363 | 9..1116 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:21:04 Download gff for
FMO07305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32791-RA | 243..1360 | 9..1116 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:57 Download gff for
FMO07305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32791-RA | 246..1363 | 9..1116 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:57 Download gff for
FMO07305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3530315..3530420 | 9..114 | 100 | | Minus |
| X | 3520042..3520133 | 512..603 | 100 | <- | Minus |
| X | 3522212..3522312 | 411..511 | 100 | <- | Minus |
| X | 3523634..3523819 | 225..410 | 100 | <- | Minus |
| X | 3523922..3524031 | 115..224 | 100 | <- | Minus |
| X | 3514002..3514172 | 853..1022 | 95 | <- | Minus |
| X | 3514868..3514987 | 733..852 | 100 | <- | Minus |
| X | 3519825..3519953 | 604..732 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:48 Download gff for
FMO07305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3417667..3417852 | 225..410 | 100 | <- | Minus |
| arm_X | 3417955..3418064 | 115..224 | 100 | <- | Minus |
| arm_X | 3424348..3424453 | 9..114 | 100 | | Minus |
| arm_X | 3408035..3408205 | 853..1022 | 95 | <- | Minus |
| arm_X | 3408901..3409020 | 733..852 | 100 | <- | Minus |
| arm_X | 3413858..3413986 | 604..732 | 100 | <- | Minus |
| arm_X | 3414075..3414166 | 512..603 | 100 | <- | Minus |
| arm_X | 3416245..3416345 | 411..511 | 100 | <- | Minus |
