FMO07309.5prime Sequence
1209 bp (1015 high quality bases) assembled on 2008-10-06
> FMO07309.5prime
CAGTCGACATGACGAAAATTAAATATGAACTTGTTCCAAGTGAGGAGCAA
GAACCAAACGAAAGTAAAAAACCTTTAAATTGGATAGTGAAAATATTATT
TGTTGTCTTGGCGCTTTTTACCCTGGTCATTTATACCTTGAGCGGCGCCA
ATAATCCGCTCAAGAACAATGCAGATCCATTTTCCCCTTGGAAATCCATG
AGACTCCTTGCGGGATCAGGTTGGACCAATAATCCCGGAGATCTGTCGAG
TCCTTTGAATGTTAAGCATACAACTCGTAGTCTGAGTACAGAGAAGCAAT
CTACGGAAGCAATCTATAATAAACTAGCAGATACTGAGAGCACCACCGAG
GATCAAACTGAGATAACTACCGTAGACCACACGGATGAAGTCGTAGAAAG
TAGCACTTCATCACCAGCTACTGGAGCATCGAAAACAGAGACTTTATATG
CACTGGAAGGAAATGGAAAGAAATACTTCGTCCATAGCCCGCAGTGCCAA
ATGAGCCACCCAAATCCGTTTGCCAATAACATTCAGCACATCTACAAGAA
ACATTCCTATATAGTGTGTGATAAAAGTCGCGACATGATCACAGTCAACT
ACAATGTAACTGACAGCACGTACAGGCTGCACAAGAACGAGAACTCCACC
TGCTGCTTCAAGCAGATCCTTCGAGCAGGAACTTCAGCCAATGCGGATCA
TAAGTACAAGCTGGGTCCTTGCGTAGAATTTCACCAGGACTTCTTGGTGC
CAACAGAAGTGAGTGCCATGATCACCTATTGCCGTCGGCCTCCATTCGAT
AAGGTGTCGCAAAAGGATGTCTTCAGTTTTGTGCATCCGCGAAAGGATCA
GATCGAAAATCCCACAACGCCGCATAGAAGAGGCCCAGCGTTTTGCTGTG
GGGCATTGATTCCATTTCCCGAATGAATCTGAGCTACGATGCCCGTATGT
ACGAGTACTTGAACAATCAACATTGGTTTGAGCTTCAGGAAACAACAGAT
GGGCGATAATACGTTTCGATCTGATGGCGTTTTCACGGAATTTAACAGAA
CTACGCGACGCACGTTGCATCTGAGAAGGTGCTGGCCTGGATGCTGTCGT
TAATTGGAAGGACTTCAAGACAGGATATCACTAACACTGCTCGCGCGAAC
TGACAGTTCCAGTGACACTCTACAGGCTTTCATCCCGACGACGAGTCAGG
GCACATCCT
FMO07309.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15695-RA | 2723 | CG15695-RA | 194..1321 | 9..1119 | 5125 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20842333..20843034 | 9..710 | 3510 | 100 | Plus |
| 3R | 32079331 | 3R | 20843085..20843368 | 710..989 | 1205 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:30:52 has no hits.
FMO07309.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:51 Download gff for
FMO07309.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15695-RA | 194..1338 | 9..1135 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:46:17 Download gff for
FMO07309.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15695-RA | 192..1336 | 9..1135 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:43 Download gff for
FMO07309.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15695-RA | 194..1338 | 9..1135 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:43 Download gff for
FMO07309.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20843085..20843379 | 710..998 | 97 | -> | Plus |
| 3R | 20842333..20843033 | 9..709 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:51 Download gff for
FMO07309.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16668055..16668755 | 9..709 | 100 | -> | Plus |
| arm_3R | 16668807..16669101 | 710..998 | 97 | -> | Plus |
