Clone FMO07312 Report

Search the DGRC for FMO07312

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:73
Well:12
Vector:pMK33-CFH-BD
Associated Gene/TranscriptDhpr-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07312.5prime Sequence

604 bp (290 high quality bases) assembled on 2008-10-06

> FMO07312.5prime
TTGGCAGCATCGATCTGACGGAGAACGAGAAGGCCGACGTTAGCATTGTG
GTGCCACGCGATGCTAGTTGGGTGGAACAGGAGGAAACGGTGGTGTCCAA
AGTCGGGGAATCCCTTGCCGGCGAGAAACTGGATGCCGTCATCTGCGTGG
CTGGCGGCTGGGCAGGTGGTAATGCCAAGAAGGATCTGGCCAAGAATGCC
TATCTCATGTGGAAGCAGAGCGTGTTGACCTCCGCCATTTCGGCAGCTGT
GGCTGCTCAGCATCTAAAGGCCGGAGGCTTGCTGGCTCTCACTGGAGCTA
AGCCCGCTTTGGAGGGCACACCCGGTATGATCGGCTATGGAATGGCCAAG
GCAGCTGTCCCCCAGCTGACCCGCTCGCTGGGCGCTGAGAAATCCGGTCT
GCCAGCTGGTTCCCTGGCTGTGTCCATACTTCCCGTAACTCTAAATACAC
CCATGAACCGTAAATGGATGCCGGATGCAGATTTTGGAACCTGAACCCGC
TCATAAGGTGGCCGGACTTTTCCTTAAGTGGACCCAGATCAGGAGAGGCC
CAAACTGGATCCCTGTTGCAGCTGATCACCACAACGGTATTTCGCAGCTT
ATCT

FMO07312.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:14:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dhpr-RB 880 CG4665-RB 129..736 1..603 2795 97.9 Plus
Dhpr-RA 1261 CG4665-RA 336..943 1..603 2795 97.9 Plus
Dhpr-RC 1087 CG4665-RC 336..943 1..603 2795 97.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:25
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9134991..9135598 1..603 2670 97.9 Plus
Blast to na_te.dros performed on 2014-11-28 19:14:26 has no hits.

FMO07312.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:43 Download gff for FMO07312.5prime
Subject Subject Range Query Range Percent Splice Strand
Dhpr-RC 336..943 1..604 97   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:46:00 Download gff for FMO07312.5prime
Subject Subject Range Query Range Percent Splice Strand
Dhpr-RA 335..942 1..604 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:50 Download gff for FMO07312.5prime
Subject Subject Range Query Range Percent Splice Strand
Dhpr-RC 336..943 1..604 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:50 Download gff for FMO07312.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 9134991..9135598 1..604 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:43 Download gff for FMO07312.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9128091..9128698 1..604 97   Plus