FMO07314.5prime Sequence
554 bp (554 high quality bases) assembled on 2008-10-06
> FMO07314.5prime
CAGTCGACATGACGGCGGCCACGGGTGGTGGGAGTAGTGGGGCGGGGGGT
GGTAAGACTGGAAAGCACAGGTCGAGGTCATCTGCCCGCTACGACGATGT
GGAAAAGCAGCAGAGGAAAAGCCGAGCCATCGTCTCCATACCGAACACCA
TCAAACTGAGTATGCTCAACAGCGGACTGCTGTCGTTTGAAAGGATAAAG
CTCGAGGCACGAGATGAGAACAATTCTCTGTCCAAGACGATACCCAACGG
ACCCATCGATATCAGGCATTTTCTCAAGCTCTGCGATCTGCGCAGAAAGT
TCCCGGTCCTCTACAAACTGGAATTCCAAACTGCGGCCAAGGTGGAGAGT
AACACCTGTCGGCATGCCTTGAAGAAGAACAACCTGGAGAAGAACCAGAA
TCCCAAGTGCATTCCCTATGACTACAATCGGGTGGTGCTGGAGAAGGTGG
GTGGCCTGCAGGACTCGGACTATGTGAACGCTTCCTATGTGGACAGCCTG
CTCAAGCCGAACGCGTACATAGTGACCCAGGGACCTGTCGAGGAGACGGT
CCAG
FMO07314.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ptp36E-RC | 4012 | CG7180-RC | 891..1436 | 9..554 | 2715 | 99.8 | Plus |
| Ptp36E-RB | 3524 | CG7180-RB | 291..836 | 9..554 | 2715 | 99.8 | Plus |
| Ptp36E-RA | 3415 | CG7180-RA | 294..839 | 9..554 | 2715 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18183572..18184117 | 554..9 | 2715 | 99.8 | Minus |
Blast to na_te.dros performed 2014-11-28 22:31:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Transpac | 5249 | Transpac 5249bp Derived from AF222049 (AF222049.1) (Rel. 62, Last updated, Version 1). | 502..547 | 349..394 | 113 | 71.7 | Plus |
FMO07314.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:00 Download gff for
FMO07314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7180-RA | 286..839 | 1..554 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:46:21 Download gff for
FMO07314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7180-RA | 284..837 | 1..554 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:02 Download gff for
FMO07314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp36E-RA | 286..839 | 1..554 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:02 Download gff for
FMO07314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18183572..18184122 | 1..554 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:00 Download gff for
FMO07314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18183572..18184122 | 1..554 | 99 | | Minus |
