FMO07316.5prime Sequence
1253 bp (1017 high quality bases) assembled on 2008-10-06
> FMO07316.5prime
CAGTCGACATGGAACCTGTGAAAGAGACGATGACCACTGTCAAGGCGGAG
AAGCCGGTAACCACCACTTGCTCCTACTGGGTGTTACGCAAAAAGCGCCG
CTGCAAGATGACTGCAAACAAGGGCAGTGAGTTTTGTGGAGCCCATGCCT
CATCGGCAGCCACCACTGCAACTTGCGATGAAAAAGCTAGAGAAGATTCC
TTCCAGGAACGTATTCCCTGCCCGCTTGATCACAAACATACCGTGTTTAA
AAGAAAACTAGCCAAACACTTGACCATTTGCAATGCCAGGGATCAGGAAA
GTTCACTGCCCTACATTGTAAAAGGAGTGAATTCTGGAGACAATCTTAAG
GAAACAGACGAAGATTTGAACAAATTCAATCAAATAAAACTGCACGAACT
GGCGGATGAAGAGTTCTACAGTCTGATCGACAAAGTTAAGAATCTGTATG
ACAAGCACATCAATTCCAGCATACAGGAACTGCAGCTGGAGCACGAATCC
CTAAAGGAGGAACTTAGTCGCAAGGACTACGGCCAGGAAACGCTACGCCA
GCTCACCCAGACCACTAGCTTGCTGGGCATCCTGGAACACGATCACCAGT
TGATGGATCACACGAGCTATATAGAATTCGGAGCCGGAAAGGGACAATTG
GCCTACTTTTTGGCCACCGTATTGCAGGAACAGAAGTTGAGTCACTCACA
GGTGGTCCTCATCGATCGAATGTCCCTGCGGCACAAGAAGGACAACAAGT
TGGCCAACAGGGAGGTGGTGCAACGTATCCGTGCTGATATCGCTGATCTT
AAGCTTTCTGCTCTGCCGGGAGCTAAAGAAAACCCAACGAACGGTGGCTT
TTTCGAAGCACCTCTGTGGAGCAGCTACAGACTTGACCCTGAGATGTATA
CTCGGTGATGAAATGCCAGCTCGGACTACGTTCTCATCGGCCTGTGTTGT
CATCATCGCTGCTCTGGCGCTCTACGTGGGACGCCAGTTTCTTCAGGAAG
CTGGAATTGGACCACGGGAGTTCGTTTATCCTTAACAAAATGGTCAGTTG
GCCAGCGTGCCACGGCTTAGCCCAAAGACGGCCGTAAGCATGAATCGGCT
GACTTCCACCTACACAGAGACGAACGCCAGACGTCTAACTCGCCAGGACG
CGAAACAATTGGCCAAATGGCAAGCGGCTCTGGAATAGGACGAACAGTGG
AATACCTTCACTATAGACAATACCAAACGGGATACTTCATGACTGACCAA
TAG
FMO07316.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18048-RA | 1409 | CG18048-RA | 83..1276 | 9..1193 | 5210 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6346193..6347240 | 9..1055 | 4925 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:54:35 has no hits.
FMO07316.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:40 Download gff for
FMO07316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18048-RA | 74..1246 | 1..1166 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:46:24 Download gff for
FMO07316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18048-RA | 69..1241 | 1..1166 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:48 Download gff for
FMO07316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18048-RA | 74..1246 | 1..1166 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:48 Download gff for
FMO07316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6346184..6347337 | 1..1148 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:40 Download gff for
FMO07316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2171906..2173059 | 1..1148 | 97 | -> | Plus |
