FMO07317.5prime Sequence
996 bp (978 high quality bases) assembled on 2008-10-06
> FMO07317.5prime
CAGTCGACATGAGTTCAGATAAGAACGGTGATATCTTGCGGCCACTTAGC
GATAGCGAAGTGGACGAACTGCTTGATCTATACAAAGTTAAATTCGGTAT
AAGGAACTTCCACTACCTATTACTGTACAACCAGCGAAAATGGGACCGCC
AGCTGAGCGAGGCTCAAATACCGCGCAATGATCTGAACCACATTTCTCTG
AGAAAGCAGTTCTACACCCATCGAAGGGGAAACTTCCGGACGTGGGGCAC
CTATGTGAGCCTTCATCGGGACATCGTGCAGAGCGTCTCCTTCTTCAGCT
GGCAGCCAGATGGAGCCGCGGAGCTGTGGGAATGCCTGGAGCAAACGCAG
CTCATCGAGTGGACACAGGGAGCCCTGCTGACCAACGTTGATCTGGGATT
TTGTAATCGAGTCAAAGAGTTGGCCGTCAGCCGCGGGGTCACCGCCATTC
AACCACGCCAGTGTTTCGGGATGGTTTTGTCGCACGAGGATGCCTTTTGT
GCAAAAGTTCCAGATCTGCCCTCTGAGTTCGAGATTCGGCGATTGAGGGC
TGAGGATGCAGCCATGGTGCACGATTCCTGGCCTAACAAGGGTGAAGGCT
CACTCACTTATCTCCAGGCGCTCGTCCGTTTCAACAAATCCTTGGGCATC
TGCCGAAGCGACACTGGGGAACTGATTGCCTGGATCTTTCAGAACGACTT
TTTCCGGACTGGGCATGCTGCAAGTGCTGCCCAAGGCGGAGCGTAGAGGA
CTAGGTGGCCTCCTAGCCGCTGCGATGAGCCGAGAAATTGCTCGGGGCGA
GGAGATCACCCTAACGGCCTGGATTGTCGCTACTAACTGGCGGTCGGAGC
CGCTGCTCAAGCGGATCGGGTACCAAAAGATCTGGGTCAATGAGTGGATT
AGCTGGTACCGAATTCTTCAGCAAGCTTTCTAGACCATTCGTTTGGCGCG
CCGGGCCAGGAAGTGGTCATATCATAATCATATCATATCATAATCA
FMO07317.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:30:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14615-RB | 1826 | CG14615-RB | 169..1080 | 9..920 | 4455 | 99.5 | Plus |
| CG14615-RA | 1356 | CG14615-RA | 257..1168 | 9..920 | 4455 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:30:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 22448532..22449235 | 713..9 | 3475 | 99.9 | Minus |
| X | 23542271 | X | 22447929..22448137 | 920..713 | 885 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:30:16 has no hits.
FMO07317.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:12 Download gff for
FMO07317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14615-RA | 251..1168 | 1..920 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:46:35 Download gff for
FMO07317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14615-RA | 251..1168 | 1..920 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:03 Download gff for
FMO07317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14615-RA | 251..1168 | 1..920 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:03 Download gff for
FMO07317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 22447929..22448136 | 714..920 | 98 | <- | Minus |
| X | 22448532..22449240 | 1..713 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:12 Download gff for
FMO07317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21849765..21849972 | 714..920 | 98 | <- | Minus |
| arm_X | 21850368..21851076 | 1..713 | 99 | | Minus |
