FMO07323.5prime Sequence
341 bp (341 high quality bases) assembled on 2008-10-06
> FMO07323.5prime
CAGTCGACATGTCGACCAAGAACAAGAAAGCCGCCGGAGGCAACGGAGTT
GCGCCGAAACAAACCCGCCAGCAGTCGCACGACTCGCAGGACTACAGCTC
CTTCAAGACAGTGCTCTTCTACTGCATGCTTATCGTTTTCCTGCCCGTGC
TGACCTTCTTTGTGCTGAAGGGCTTCGTTCTGGACCAGTTCCTCGACATT
TCCGAAGTCAAAGTGAACATAGCATCCGCCGTGGGAGCGGTCGTTGCATT
GCACATCGCCCTGGGACTCTATATATACAGGGCCTACTTTGGGGCACCCG
GTTCCAAGGGCTCCAAAACGGACGCAAGCTTTCTAGACCAT
FMO07323.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5969-RA | 947 | CG5969-RA | 116..430 | 9..323 | 1575 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20474032..20474274 | 81..323 | 1215 | 100 | Plus |
| 3L | 28110227 | 3L | 20473898..20473970 | 9..81 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:29:57 has no hits.
FMO07323.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:01 Download gff for
FMO07323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5969-RA | 116..433 | 9..327 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:46:18 Download gff for
FMO07323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5969-RA | 102..419 | 9..327 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:53 Download gff for
FMO07323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5969-RA | 116..433 | 9..327 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:53 Download gff for
FMO07323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20473898..20473969 | 9..80 | 100 | -> | Plus |
| 3L | 20474032..20474277 | 81..327 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:01 Download gff for
FMO07323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20466998..20467069 | 9..80 | 100 | -> | Plus |
| arm_3L | 20467132..20467377 | 81..327 | 99 | | Plus |
