FMO07325.5prime Sequence
1178 bp (977 high quality bases) assembled on 2008-10-06
> FMO07325.5prime
CAGTCGACATGACGCGAATCATTACGTCCGGATTGTCCTGGAACACCTCT
TCGAATGCCTGCCAAAGCAAGGAGGAAAAAAATAAGAACACCATTAAGTT
CGATCTTCCTTACGCAAAGAAGCCGGATTCCGGAGACAGCCTCAAGATTG
CTCCCATCAGCACCATGAACGGCCAGGGCTGCGAGCTGGGCCACAGCAAT
GGCGACATCATCTCACAGAATCAACAGAAGGGATGGTGGACCATCGGCCT
GATCAACGGCCAGCACAAGTACATGACCGCGGAGACCTTTGGGTTCAAGC
TCAACGCCAATGGCGCCAGTCTGAAGAAGAAGCAACTGTGGACGCTGGAA
CCCTCGAACACCGGTGAAAGTATTATCTACTTACGATCTCATCTGAACAA
GTACCTTTCGGTCGATCAGTTTGGCAACGTGCTGTGCGAGAGCGATGAGA
GGGACGCGGGCAGCCGCTTCCAGATCAGCATCAGTGAGGACGGCAGCGGA
CGTTGGGCGCTGAAGAACGAGTCGCGCGGCTACTTTCTGGGCGGCACTCC
GGACAAACTGGTCTGCACGGCCAAGACGCCCGGCGCCAGTGAGTTTTGGA
CGGTCCATTTGGCTGCCCGGCCGCAGGTGAATCTGCGCTCCATCGGACGC
AAGCGATTCGCCCATTTGTCGGAGTCGCAGGACGAGATCCATGTGGACGC
CAATATTCCTTGGGGCGAGGATACGCTCTTTACGCTGGAGTTCCGTGCCG
AGGAGGGCGGTCGCTATGCTCTGCATACGTGCAACAACAAATATCTGAAC
GCCAATGGAAAATTGCAGTGGTGTGCAACCGAGGATTGCCTGTTCAGTGC
GATATCATGGGTGGGCATCTGGCGCTGCGGCGATCGTCAAGGTCAGTACT
TGCGGCCATTGGCTCCAAGGCGTGTTGAAGTCCCGCTCGTCTCAGTGGAC
GCGGGATGACCTCTCTCGCTGGAGGATTGCCTGCCCAGCTTTCTTTATAG
CCGGACTCAATTTGCGAATTGTGACGTTAAGCAGGGCTCATGTGGACGCA
ATCAGAACAAGGCAGTGAAACGAAACGTCACCTGGAATGCATGGGCGGGC
ACCGTGGACCTCTCCACCAGAATGCGATATCGTGCTTGGTCGGGGGGCGG
TGAATCCTAGCCCACACGGATATGCCTC
FMO07325.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
sn-RG | 2322 | CG32858-RG | 70..1104 | 9..1037 | 4710 | 97.8 | Plus |
sn-RB | 3358 | CG32858-RB | 668..1624 | 87..1037 | 4320 | 97.6 | Plus |
sn-RA | 3101 | CG32858-RA | 411..1367 | 87..1037 | 4320 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7983988..7984408 | 370..790 | 2105 | 100 | Plus |
X | 23542271 | X | 7982371..7982653 | 89..371 | 1415 | 100 | Plus |
X | 23542271 | X | 7984470..7984722 | 791..1037 | 495 | 88.7 | Plus |
X | 23542271 | X | 7964093..7964172 | 9..88 | 400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:25:44 has no hits.
FMO07325.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:19 Download gff for
FMO07325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sn-RG | 70..1116 | 9..1048 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:20:58 Download gff for
FMO07325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sn-RC | 70..1116 | 9..1048 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:13 Download gff for
FMO07325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sn-RG | 70..1116 | 9..1048 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:13 Download gff for
FMO07325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7982371..7982651 | 89..369 | 100 | -> | Plus |
X | 7964093..7964172 | 9..88 | 100 | -> | Plus |
X | 7983988..7984408 | 370..790 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:19 Download gff for
FMO07325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 7858126..7858205 | 9..88 | 100 | -> | Plus |
arm_X | 7876404..7876684 | 89..369 | 100 | -> | Plus |
arm_X | 7878021..7878441 | 370..790 | 100 | -> | Plus |