Clone FMO07325 Report

Search the DGRC for FMO07325

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:73
Well:25
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07325.5prime Sequence

1178 bp (977 high quality bases) assembled on 2008-10-06

> FMO07325.5prime
CAGTCGACATGACGCGAATCATTACGTCCGGATTGTCCTGGAACACCTCT
TCGAATGCCTGCCAAAGCAAGGAGGAAAAAAATAAGAACACCATTAAGTT
CGATCTTCCTTACGCAAAGAAGCCGGATTCCGGAGACAGCCTCAAGATTG
CTCCCATCAGCACCATGAACGGCCAGGGCTGCGAGCTGGGCCACAGCAAT
GGCGACATCATCTCACAGAATCAACAGAAGGGATGGTGGACCATCGGCCT
GATCAACGGCCAGCACAAGTACATGACCGCGGAGACCTTTGGGTTCAAGC
TCAACGCCAATGGCGCCAGTCTGAAGAAGAAGCAACTGTGGACGCTGGAA
CCCTCGAACACCGGTGAAAGTATTATCTACTTACGATCTCATCTGAACAA
GTACCTTTCGGTCGATCAGTTTGGCAACGTGCTGTGCGAGAGCGATGAGA
GGGACGCGGGCAGCCGCTTCCAGATCAGCATCAGTGAGGACGGCAGCGGA
CGTTGGGCGCTGAAGAACGAGTCGCGCGGCTACTTTCTGGGCGGCACTCC
GGACAAACTGGTCTGCACGGCCAAGACGCCCGGCGCCAGTGAGTTTTGGA
CGGTCCATTTGGCTGCCCGGCCGCAGGTGAATCTGCGCTCCATCGGACGC
AAGCGATTCGCCCATTTGTCGGAGTCGCAGGACGAGATCCATGTGGACGC
CAATATTCCTTGGGGCGAGGATACGCTCTTTACGCTGGAGTTCCGTGCCG
AGGAGGGCGGTCGCTATGCTCTGCATACGTGCAACAACAAATATCTGAAC
GCCAATGGAAAATTGCAGTGGTGTGCAACCGAGGATTGCCTGTTCAGTGC
GATATCATGGGTGGGCATCTGGCGCTGCGGCGATCGTCAAGGTCAGTACT
TGCGGCCATTGGCTCCAAGGCGTGTTGAAGTCCCGCTCGTCTCAGTGGAC
GCGGGATGACCTCTCTCGCTGGAGGATTGCCTGCCCAGCTTTCTTTATAG
CCGGACTCAATTTGCGAATTGTGACGTTAAGCAGGGCTCATGTGGACGCA
ATCAGAACAAGGCAGTGAAACGAAACGTCACCTGGAATGCATGGGCGGGC
ACCGTGGACCTCTCCACCAGAATGCGATATCGTGCTTGGTCGGGGGGCGG
TGAATCCTAGCCCACACGGATATGCCTC

FMO07325.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:45
Subject Length Description Subject Range Query Range Score Percent Strand
sn-RG 2322 CG32858-RG 70..1104 9..1037 4710 97.8 Plus
sn-RB 3358 CG32858-RB 668..1624 87..1037 4320 97.6 Plus
sn-RA 3101 CG32858-RA 411..1367 87..1037 4320 97.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7983988..7984408 370..790 2105 100 Plus
X 23542271 X 7982371..7982653 89..371 1415 100 Plus
X 23542271 X 7984470..7984722 791..1037 495 88.7 Plus
X 23542271 X 7964093..7964172 9..88 400 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:25:44 has no hits.

FMO07325.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:19 Download gff for FMO07325.5prime
Subject Subject Range Query Range Percent Splice Strand
sn-RG 70..1116 9..1048 97   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:20:58 Download gff for FMO07325.5prime
Subject Subject Range Query Range Percent Splice Strand
sn-RC 70..1116 9..1048 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:13 Download gff for FMO07325.5prime
Subject Subject Range Query Range Percent Splice Strand
sn-RG 70..1116 9..1048 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:13 Download gff for FMO07325.5prime
Subject Subject Range Query Range Percent Splice Strand
X 7982371..7982651 89..369 100 -> Plus
X 7964093..7964172 9..88 100 -> Plus
X 7983988..7984408 370..790 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:19 Download gff for FMO07325.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 7858126..7858205 9..88 100 -> Plus
arm_X 7876404..7876684 89..369 100 -> Plus
arm_X 7878021..7878441 370..790 100 -> Plus