FMO07410.5prime Sequence
1264 bp (20 high quality bases) assembled on 2008-10-22
> FMO07410.5prime
CAATCCACATGCTGCAATCCATTTATCATCATTATTTAAGACCGGATTAT
ATGACAGCTGCATCTGCCCCAACAGCGCTGGACAACAAAAGCACTCCGTT
GGCTCTATTGGCCCAGACATGCGACGCCATCGGGGCGGATACCACAAACC
CCAAGCTGCTGGCGGCGAACATCAAAAATTCCACAAAGCAACTGCAGCAC
CACCCAAAGGGCTCGAGTGGATCGGGTGGATCCGGCTCCTTTGGCCTCAG
CCATTAAGCATCAATGGATGGCAGAGCACGCTATAAATCCTCACCGGTTA
ACAGTCATTCATCCATCGTTATCACCGGTTCCGTGGAGCAGCAGCAATTG
CCCCCCGCCCATGGGAGCAGCACCAGCATCAAACCGACACCGACCACATT
TAAGCCCTACCAGCCGAAAAACAAAATCAGCAATATAACCACAGCCGCCG
ATTGCGGGGCCACAAATCTCATTACCAACAACACCAGTGCCCAGCAGCGG
GTTAAGACCCCCGAATCGATGACAAACGGAGGAGGACAACGTTACGACTC
GAACCAAAGTGCCAGCTCGCAGCACCGGGAATCGCCGACAGCAGCCGGCT
CACTGAAAAAGACCCCCACCTCGGGCCTGGATGGTGGTGTGATGCACTAT
AATGGCAGTCCCGGCCTGCCGCCAACCTCCTCGACCACGCCCGGTCTCAA
CAACTCTAAAAAGACTGCCTCCATGCACAGTCCCAGTGCAACGACAGAGG
CAGCAGCGGCGGCTGCCCAAATCGCCGGCTCGAATCGCCTGCACGAACCT
CCCTCACCGCCGCCAAAGAGACAACTATGTTAAGGCTCTGCACGCGCCAG
CCAACAAGGATCCGCCTCACAGCAGCAGCTGCTGCATCCTATTATCCACC
GGGTTACGACAGCCCTCTATTCCATGGACTTGATGACCGCCAACTCGTTG
ATGTCGCCACACCACCCCATGTCATTGCGTCGGCGATGAATCCGTATCTG
ATTTCGCCCGATGAAGGCCGTACGGACAATTGATGATGGCGGACGCACCT
TAATAGGTGCCGGAACCCCATTGACCGAAGTACGGACGGTCCGCCTGTAC
TTACCATTGCCGCAAGTCGCCGGTATTCTGCTGCGCGTAGAGTTGTCCGC
GTGCATGTGCCAATGGTAGAAGTGTGTATTTGCCTGACCGTGTTCTCATC
CCTAATCAGCGGGAAGCCAAGAGAAAGAATCCGAGTGGATACCTACTCAT
GTGTGCGATCTACG
FMO07410.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| elB-RC | 3323 | CG4220-RC | 1114..2155 | 9..1042 | 3840 | 91.9 | Plus |
| elB-RD | 3326 | CG4220-RD | 1114..2158 | 9..1042 | 3800 | 91.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14392228..14393059 | 904..77 | 3075 | 92.4 | Minus |
| 2L | 23513712 | 2L | 14391841..14391940 | 1001..902 | 330 | 93.1 | Minus |
| 2L | 23513712 | 2L | 14408368..14408436 | 77..9 | 285 | 94.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:17:55 has no hits.
FMO07410.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:20:56 Download gff for
FMO07410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| elB-RC | 1112..2126 | 9..1017 | 92 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:50 Download gff for
FMO07410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| elB-RC | 1114..2128 | 9..1017 | 92 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:45 Download gff for
FMO07410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| elB-RC | 1114..2128 | 9..1017 | 92 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:45 Download gff for
FMO07410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14392230..14393058 | 78..902 | 92 | <- | Minus |
| 2L | 14408368..14408436 | 9..77 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:50 Download gff for
FMO07410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14392230..14393058 | 78..902 | 92 | <- | Minus |
| arm_2L | 14408368..14408436 | 9..77 | 94 | | Minus |
