FMO07417.5prime Sequence
1120 bp (1029 high quality bases) assembled on 2008-10-22
> FMO07417.5prime
CAGTCGACATGGGAGTTCCCACAAGCGATTGGATATACTGGTGTCGCCTG
TGCGCCCGCGACGACGTTGTATACAAAGTGCGCGAGCGGGACGACGATCT
GGTTAGGATTATCAGCAAATGCTTTGATGTGGAGATGACCCTCGAGGAAC
CGGAACTGGGCAGCATGTTGTGCGAGGAGTGCTACTCGGTGATTGGCCAG
CTGATCACCTTCTCGGATAGCGTTTCCAAAGTACAAGCCATTTTTGAGCT
TCTGCGACACTCGGAGCCGCAGGATAGCCAGGACTTGGACGCCCTGCGTC
TGGAATACGGCCTTCCGCCGGCCTGCAAGCAGGACCTCGAGTTCCTGGAC
ATAGACGATACGGAGGATAGGTGTTCCTTGGTAGAGGAGCTAACGATATC
AGACCATTCCACATCTCCGTCACCCGATTTTGAAGCACAGACCGTGCGAA
CACGAGCTAATCTCAAACAGTGTAATTCCGATCCCAAAGTGCTAGCCTCA
CCTACTGCATCAATTCCTGAAGTTGAAACAAAACGAAGTCGCCGACAGCA
GTTTGCGGCTAAGCGAAATTCCAAAGTGTACACTGCAACCGAGTCGGATG
ATGAGGAGGCCATTCTAGACGAAGACGAGGCCGTATCCCCGCCGCCTTTG
AAGCGAAAAAGAGGCAGACCCAAGGGCTCAGGCAAACAGAAAAACGTGGA
CGACAGCGATAACGTAACTTCCCGCGAACCAGACGACAATGCTAAATCCA
AACAAGATGACAAGACATCCGAATTGAGCATGTCACCCCATGGCTCCCAG
AGTTCGAATTTCGTCGATTATCCCTGCAAAATCTGCACGAAACCTTTATG
TCCTTCATGGCTCTGCGCAGCACAAGCACGACATGCACGGCGGTCCGAAG
AAATACGTTTGCGATCCCTGCGGAAGGGTTTGAAGACCTTCACATCGCTG
GTGAGCACCAGCTGGTTCACACGGAGAGAGCCCTGTTATATGCCCCGTCT
GCAATGCTGTTTAAGAACAAGCTAGCTGAAAGTGCCACAGTCAGACACAT
GGTGAGCCCAGTTTGAATGCAATGTCTGGCGGCAAAAGCTGCCGACACCG
GGCGATTTCTTTACAGCACA
FMO07417.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wek-RB | 2033 | CG4148-RB | 118..1238 | 8..1120 | 5115 | 98 | Plus |
| wek-RA | 1691 | CG4148-RA | 118..1238 | 8..1120 | 5115 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15767166..15768047 | 1009..133 | 4070 | 98.8 | Minus |
| 2L | 23513712 | 2L | 15768106..15768232 | 134..8 | 635 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:41:09 has no hits.
FMO07417.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:13:12 Download gff for
FMO07417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wek-RA | 79..1205 | 1..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:20 Download gff for
FMO07417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wek-RA | 111..1237 | 1..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:30 Download gff for
FMO07417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wek-RA | 111..1237 | 1..1119 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:30 Download gff for
FMO07417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15767140..15768045 | 135..1031 | 98 | <- | Minus |
| 2L | 15768106..15768235 | 1..134 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:20 Download gff for
FMO07417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15768106..15768235 | 1..134 | 97 | | Minus |
| arm_2L | 15767140..15768045 | 135..1031 | 98 | <- | Minus |
