FMO07430.5prime Sequence
1214 bp (1042 high quality bases) assembled on 2008-10-22
> FMO07430.5prime
CAGTCGACATGGCATACGAACGTTTTGGAATTATTCTTCAAAGTGAACAG
TACGATGAAGATATAGGCAACACAAAAGTCAATCAGAAAATGAATGAAGG
CAACCACTACGACTTACACAGAAAAAATGCGTTTGACCGAATTATTCATT
CAGAATCAAAAAAAGGTGATAACGTAATTAATTACAACATTCATGAAAAC
GACAAAATAAAAGCGGCTGACAATATATTTTCTTCTAAATTAAAAATGAA
CCCGAATATGAGCTATGAAATGAATATCAACTGTTTTAAAAATATTGGAT
ATGGCGAAAATCAAGAAACTTCAAAAGTTTTAACAAATAGTTTATCGAAC
AATGATATTAATACCGAAGAGTCTGGTGTTGTCGATAAAAATTCACCTTT
CCTAACCTTAGGTACAACTATACTTAATTCAAACGGCAAGTCAAGACGGT
GGGAACAAAAGCTTGTTCATATTAAAACTATGGAGGGAGAGTTTAGTGTT
ACAATGTGGGCATCCGGGATATCAGACGATGAATACTCTGGTTCAGATCA
AATCGTTGGGGCTTCGGATTTATTAAAAGGAAAGGAAGAATTTGGCATTG
ATGGCTTCACGTCTCAACAAAATAAAGAATACCAGAAAATGGAGTCAAAA
TTTACAAATGCACAGACCCTTGAAATGCCGCATCCTATAAGCTCAGTTCA
GATCATGGATCATTTAATAAAGGAAAGGGGAAATTTATCGCAAGAAAATA
ATATTTCCGAAAGAATTTTATCTAAGACCACCTTAAGCTTTGAAGAGCCA
ATCTTGCTTCCGGATTCTTCAAGTATTGAGTTAGTTAACGAAACTGCCGC
AATGACATTAATAATCACAGAACTTTAAGTAATCATACGGGCAACACCGG
TGATCTGCATGCTTTGCCCAGCTCAGTGCCATTTCGTATTGGCTTGCATG
AGGGGCAAGTAAATGATTGCTTATCAACAATATCACAATCACTCCACAGA
CAATACGGACTCGACTGGATGGGGGGAATGATCTTTCCGAGTTACGTATC
CTTTTACAAATGATAAAAAAAGCTGCCACATAGGTTGTAATAGCAATCGA
ATCATCTGCATGCAAAATTTGCCACTCGTCTCGAGTCATGTTTGGCAATG
GAAGCTCGTAAGCTAAGCTTAGACTCATGTTCCACGGTCTACTTCCAAGT
AACTTCAAGGATAG
FMO07430.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pho-RB | 2159 | CG17743-RB | 183..1278 | 9..1092 | 5080 | 98.3 | Plus |
| pho-RA | 2381 | CG17743-RA | 405..1500 | 9..1092 | 5080 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 1174178..1174928 | 991..242 | 3705 | 99.9 | Minus |
| 4 | 1348131 | 4 | 1174982..1175125 | 241..98 | 720 | 100 | Minus |
| 4 | 1348131 | 4 | 1181047..1181138 | 100..9 | 460 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 20:53:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 2296..2468 | 159..335 | 110 | 53.1 | Plus |
FMO07430.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:13:29 Download gff for
FMO07430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pho-RB | 165..1254 | 3..1082 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:10 Download gff for
FMO07430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pho-RA | 399..1488 | 3..1082 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:32:46 Download gff for
FMO07430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pho-RA | 399..1488 | 3..1082 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:32:46 Download gff for
FMO07430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 1174159..1174928 | 242..1008 | 99 | <- | Minus |
| 4 | 1174982..1175123 | 100..241 | 100 | <- | Minus |
| 4 | 1181048..1181144 | 3..99 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:10 Download gff for
FMO07430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 1194785..1195554 | 242..1008 | 99 | <- | Minus |
| arm_4 | 1195608..1195749 | 100..241 | 100 | <- | Minus |
| arm_4 | 1201674..1201770 | 3..99 | 96 | | Minus |
