FMO07433.5prime Sequence
545 bp (545 high quality bases) assembled on 2008-10-22
> FMO07433.5prime
CAGTCGACATGAACAACGGATTCAGCACCGGCGAGGAGGACAGTCGCGGG
CACACGGACCAAACGTGCTGCCTAATCGACGACATGGAGCGGTGTCGCAA
CCAGGCTGGCTACGCCAGCTACTCCAAGCGCATCCAGAAGACGGTGGCCC
AAAAGCGGCTCAAGCTCAGCAGCGATCCGGCCGCGCAGCACATTTACATC
TGTGACCACCACAAGGAGCGCATCCAGTCGGTGCGCACCAAGCGTCGGCG
CAAGGACAGCGAGGACGACAGCAACGAGACGGACACGGACCTGCACGAGT
TCCCCGATCTCTACCAGCTGGGCGTGAGCACGCTGCGACGCTACAAGCGC
CACTTCAAGGTCCAAACGAGGCAGGGCATGAAGCGGGCGCAGCTGGCGGA
TACAATTATGAAACACTTCAAGACAATACCTATCAAGGAGAAGGAGATCA
TCACATTCTTCGTGTACATGGTGAAGATGGGCTCGAATAAGCTGGACCAG
AAGAACGGCCTTGGCAACGACACCACCGCAAGCTTTCTAGACCAT
FMO07433.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sap30-RB | 1994 | CG4756-RB | 524..1042 | 9..527 | 2580 | 99.8 | Plus |
| Sap30-RA | 1669 | CG4756-RA | 199..717 | 9..527 | 2580 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16787950..16788342 | 9..401 | 1965 | 100 | Plus |
| X | 23542271 | X | 16788567..16788692 | 402..527 | 615 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:42:00 has no hits.
FMO07433.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:13:33 Download gff for
FMO07433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4756-RA | 191..718 | 1..532 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:03 Download gff for
FMO07433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sap30-RA | 191..718 | 1..532 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:26:09 Download gff for
FMO07433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sap30-RA | 195..722 | 1..532 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:26:09 Download gff for
FMO07433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16787946..16788342 | 1..401 | 99 | -> | Plus |
| X | 16788567..16788697 | 402..532 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:03 Download gff for
FMO07433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16681979..16682375 | 1..401 | 99 | -> | Plus |
| arm_X | 16682600..16682730 | 402..532 | 97 | | Plus |
