FMO07435.5prime Sequence
1199 bp (993 high quality bases) assembled on 2008-10-22
> FMO07435.5prime
CAGTCGACATGACGCGCGTAACGAGAAGTGAAATCTCCCTGGACATGGAG
TTCTGGGTGGAGGAGCTGTCGCCGGCACAATTGGCGTACTACGAGAAGAT
TACTAACGAGCACAACGCGGTGAAGGGTGCACTAAAGAACGCGGTTAGCG
CCAACGAGGGCAAGGAGCTGTTTAACGGCCAGGTGTTCCAGGCCTACTCC
TTTAAGGGCAAAGTGCTGCAGGAGCTCAAGGAGGCTACGCTGCCCAAAAA
ACCACCCAAGCCGACGGACTCTCCCTCAACACCCGCCGCCCAAAGCGGTG
GCACAGGGCGGGGTCGTGGCCGCCCACCACGACAACCATCCAACATCGCC
TACCTGGAGTCCTCCGATGAGGGAGACGACGATATGCCGCTGGCCAAGCG
ACTGGCGCTGTCTGCAGGCAAAAAAGCAGTGGCCGTGGCCAATGCATCTT
CCTCGTTCACCCCGAAATCCAGTAAGAAGGCTGCATCCGCTGCTAGTGGA
GGATCTTCTTCACCGGTACCTAAGAGCAGTGGAAAACTATTTAAGGAATC
CAAACCGGACATCGAATCGCCGCCGAAGAACTACCGCCCCGCCGAGGTTA
ATTCGGTGGGCGGTCTGGTGGTGGGCAGCACCGACGAAAGCAAGGATAGC
AAAGACGGCAAGGATGGCAAGGATAACAAGATGCAAGGAAAGACATATCC
ATCTCTGGTGGTGCTAGCAAAGCCTTTTCTCAAGATCAAAGACATGGCTG
CCACCCGCAGCAAGCTGGACTCGAAAGTTAAGCTGGTGCTCATGCTTACG
CCCATAAATTCTGCGAGTGGCTGCTCCAGGAGGGATTGCTACGCGCTCAA
CAGCATTGCATAAACCATCGCACCAACGAGCTCAAATTGGGAATTTATTC
GATGTGACCAAGTTTCCCTACACTGGTGGCTATGTGTGATCAGCGATGTT
GCCCCTACCGCTTCGTCTTCCGTGTTCAACAATTCCATTTCGAAGAGCCC
AGCACCCACCCCATCCTGTTGAAGTATTACACACTGGGCCTTGCCGACAG
TATCAAAATGGTGGTGCAGTGGATAGGTGACTGGGTTTAATCCAAGGAAA
TCTAACCTGCCTTAGTCCATTGGCATTTGGCCAGGATCAATGCAAGACCT
GGCGTCCTGCAGTTGAGAAACTGGGTATATTATTCTCAGAGGACCCCAT
FMO07435.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| row-RC | 4414 | CG8092-RC | 146..1284 | 9..1131 | 4940 | 96.9 | Plus |
| row-RB | 2281 | CG8092-RB | 146..1284 | 9..1131 | 4940 | 96.9 | Plus |
| row-RA | 4414 | CG8092-RA | 146..1284 | 9..1131 | 4940 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15212606..15213489 | 891..9 | 4340 | 99.7 | Minus |
| 2R | 25286936 | 2R | 15212454..15212556 | 990..890 | 320 | 96.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:19:56 has no hits.
FMO07435.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:13:21 Download gff for
FMO07435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8092-RB | 137..1226 | 1..1079 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:48 Download gff for
FMO07435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| row-RA | 139..1228 | 1..1079 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:46 Download gff for
FMO07435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| row-RA | 139..1228 | 1..1079 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:46 Download gff for
FMO07435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15212607..15213496 | 1..890 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:48 Download gff for
FMO07435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11100112..11101001 | 1..890 | 99 | | Minus |
