FMO07443.5prime Sequence
1198 bp (994 high quality bases) assembled on 2008-10-22
> FMO07443.5prime
CAGTCGACATGGAAGGCGGCAAGGGCGAGGGCAAGAGAATGAAAGAGGAG
GCGCCAAGCAAGAAGTTGCCGCCTAAAATCTACGGCGGCGATGCGGGCAC
CCCCACGAAGGCGGCCCACGACGAGATACTCAGCTCTCTGCTGCGGATCA
ACAACTTCGACTCGATATCGAGCATCAAGGACGAGTCGCTGGACATCGAT
CTGTCGGCGTGCGTGACCATCAGCTCCGCCAGCCTGGTCAATGGTAACAG
TCTCTCCTCCACCGACTTTTGGCGCGTTTTGGACGAGAGTGCCCAGAACA
ACACCGAGCTGAATCTATCCTCGGACGTCTGCCGCGATGACTTGGCTGCC
ACCAGCTCGTCAACCGTGCCCAGCACTCTGACCAGTGATAACCACTCCAG
CTCGGAGTTTAGTGTGACTTTCCTGCGGCCCGAGCCCCCGAATGCTTTCA
CTAATTCCCCGTTTAAGAAGACTTCGTCCAGCGGCACCTCCACACCCGTA
AAGCTATCGCCCGAGCAGCTCCACCAGCAGCATCAGCTCCAAATGCCCCA
GTCTCAGCTGCTGCAACGCAAGCCAAAGCTGCCGGCGGCGACGGCGGTGC
GTCTGAAGGTCTTTAAGGAGGAGCCGCCCGAGGAGAAGCATCCGCCGGAG
CAAGTGGTCACCAAGGTAGAGGTGTGCGAGTCTGAGCTGCTGCCGCCATC
GTTTACCATATTCCAGCAGGCCAATCGGCTGAATCGGTGGCGGATGCGGC
TAGCATGCCGCCTCCGGCTGCTTCGGAAACGAAGCCGTTGGAGGTGGACC
CGGCACCTCTACACAAGTGTCTCGACTGCACGGACTGCTGCTGGAGACGC
CCGATGAGTGGCCAAGCATGAGGCGGCCGCTCACAGGCTGAGCTCATCTA
TCGTTGCAGCGAGTGCCAGCGGGAATTCGAGTTGTTGGCTGGTTTGAGAG
CACCTAAGACCCACCGCACCGAGGCCGCACGACCCTGGAAGAAGTGTCTG
ACTGCGGCAGTGCTCAAATGGGAAGCATGTGGATGCATCGGAAGATCACA
GCGATACAGAAAAGTACAGGCCACTCTGCGCAAGGTTGTGCAAATACCTA
CGCACACAGGCGAATTCTCTTCGGAATCGTTCCAATGTCAGTCAGCATTC
GGAGCTCATCTGAGCACGAAGATCATGGCGCAACGCCTCCTATCGATG
FMO07443.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:32:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wdn-RA | 3184 | CG1454-RA | 253..1315 | 9..1056 | 4895 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 28810113..28811085 | 974..9 | 4505 | 99 | Minus |
Blast to na_te.dros performed 2014-11-28 23:32:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 122..242 | 493..614 | 121 | 57.7 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9152..9272 | 493..614 | 121 | 57.7 | Plus |
FMO07443.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:11:39 Download gff for
FMO07443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wdn-RA | 246..1327 | 1..1067 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:34 Download gff for
FMO07443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wdn-RA | 245..1326 | 1..1067 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:15 Download gff for
FMO07443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wdn-RA | 245..1326 | 1..1067 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:15 Download gff for
FMO07443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 28810070..28811091 | 1..1012 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:34 Download gff for
FMO07443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24635792..24636813 | 1..1012 | 98 | | Minus |
