Clone FMO07449 Report

Search the DGRC for FMO07449

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:74
Well:49
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31460-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07449.5prime Sequence

449 bp (449 high quality bases) assembled on 2008-10-22

> FMO07449.5prime
CAGTCGACATGTCCGCTTCAGTGAGCAGTAAGAGCACCGTGGTATCCTCC
ATCATCTCGGGCCTCCTGAGCATTGTTTTGTTCGGCACACTGCGTTTCTG
CTCAGAATGGTTTAACGACTCGCAGCTGAGGGTCCTTTTGGGCGGATACC
TCTTCTCCTGGGTGTTCATCCTGAGCCTCACGTGCGTCTCCAACGCGGAG
ATGGTTGTTTTCGGCCAGGACTTCCAGGCCAAGCTGCTACCAGAGATTAT
TTTCTGTCTCTCACTCACGGTGGCCGCCGCGGGACTCGTGCATCGTGTCT
GCGCCACCACCAGTGTTCTCTTTTCCCTGGTGGGGCTCTACTTCCTTAAC
AGGATCTCCACGAAGTATTACTCCGTTCAGGTGCCCAGCGTGGATGCTCC
TACGACGAGAAAGGGCGGAAAGAAGTTCAAAGCAAGCTTTCTAGACCAT

FMO07449.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG31460-RB 717 CG31460-RB 211..633 9..431 2115 100 Plus
CG31460-RA 554 CG31460-RA 48..470 9..431 2115 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:25
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8562943..8563361 13..431 2095 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:17:27 has no hits.

FMO07449.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:11:48 Download gff for FMO07449.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31460-RA 25..464 1..441 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:44 Download gff for FMO07449.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31460-RA 41..480 1..441 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:31 Download gff for FMO07449.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31460-RA 41..480 1..441 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:31 Download gff for FMO07449.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 8562940..8563371 8..441 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:44 Download gff for FMO07449.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4388662..4389093 8..441 98   Plus