FMO07450.5prime Sequence
1212 bp (987 high quality bases) assembled on 2008-10-22
> FMO07450.5prime
CAGTCGACATGGGCGGCCCAACGGCGCCGGTAGCCAGCAGTGGCGAGGTG
GGACAGACGTACTGCCTCCGCTGGAACAACCACCAGACCAATCTGGTACA
GATTCTACACGCCCTGCACGAGGTGGGCAGCTATGTGGACTGCAGCCTGG
TGGTGGACGATGAACAGTTCCAGGCCCATCGCGTGGTTCTGGCGGCCAAT
TCACCGTATTTCCAGCACATCCTGAAGGATGTGCCGCAGGACCACTGCAG
CATCATACTGCCGGGAGTGAAGGGCTTCGAGATTGCCGCTTTGCTGCAGT
ACATGTACACGGGCGAGACGACGGTGACCAAGAGCCAGGAGCCGGAGATT
CTGCGCACAGCCAAGGAGCTTCAGGTCAAGGGTCTGTACGACAACTTGAT
GAAGTTCAATCATGCCAGCGTCACGCCCACCTCCAGTTCGGGAGCTGGCG
GAGCCAAGCCCCAGAACGGATCAGCATCCAACCACTCCTCATCCGTGATC
TCCACATCCACGCACATCTCGCCCAGTGCCGCCATCTCGAGCAGCTGCTC
GCCACCACCGCCGCCGCAGTTTGGCTATCAGCCGGGCTACAGCCATTATC
CTCAGCAGCAGCCGATGTCGGCTAGTCAGATTCCGGCCGGTGAGGCTCCA
CTGACCCCCACCCAGGCCACACCCCACTCGGCGGCCTCGGGAGCGGGAGA
AGCCGGTGGACAGTGGCCACTGACACCCTCCGCCGCCCGCCGCCATGTTG
AACTCTGTCTACGAATCAGCCGCCGATATGAATCCTCTCAAGCGCAAGAA
GCTTGTCGGCCATTTCAAGCATGCTTCTGAGTGGAACCGCGACACACCCA
TCCTGAGAAACGTTCTGGCCCAAGCTAATCCCGCTGACTTCCTCGCAACC
CGGACCAATGAATGCCAATGGAGAGAAGACGCCCACTCATCCCCACCAGA
ACACCCAGCTTCCTGCCGGATTGGGAGTAGTGGAGGCCGGGCCCAACCAC
CAGCCTCCATTAGTTCGCACTACGCCGCGACAGGACCACTTTCCACTCTA
CACCGTATCGTTCCTTGGAGAAGGAAACCGGTCAGTCTTGCCGCAAGAAT
CGGGATTGAGCCAATCCAGCAGTATACGATCGGATTGAATGTCCCCTTCA
ACGGTGAGGAGGATTAGGCCTGTAGCAGACAGAGAATACGCCCGTCCCAG
TATGCAACTACT
FMO07450.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rib-RC | 3956 | CG7230-RC | 689..1806 | 9..1127 | 4890 | 96.4 | Plus |
| rib-RB | 4244 | CG7230-RB | 977..2094 | 9..1127 | 4890 | 96.4 | Plus |
| rib-RA | 3956 | CG7230-RA | 689..1806 | 9..1127 | 4890 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19278129..19279097 | 9..979 | 4660 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:52:24 has no hits.
FMO07450.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:11:49 Download gff for
FMO07450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rib-RA | 689..1663 | 1..979 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:31 Download gff for
FMO07450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rib-RA | 683..1657 | 1..979 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:32:17 Download gff for
FMO07450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rib-RA | 683..1657 | 1..979 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:32:17 Download gff for
FMO07450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19278123..19279097 | 1..979 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:31 Download gff for
FMO07450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15165628..15166602 | 1..979 | 99 | == | Plus |
