FMO07455.5prime Sequence
1249 bp (1034 high quality bases) assembled on 2008-10-22
> FMO07455.5prime
CAGTCGACATGAAAGAGTTTCAAAGAATGTTGATGTTGCAATACAGCAAG
CATGGCGAGTGCATACTCAAAGAAATCGGAGCAGCCTTCAGAGGGGAGCA
CCCGGCGGACCTGACCATCGTCTGCGAGAACAAAGTAAAGCTGCACGCCC
ACAAGTTGGTCCTGGCGGCCGCCAGTCCGTTGATAAGGAACCTGCTGGAG
GACACCCACTTGAGCGACTGCTCCACCACCGTATACTTTCCGGACGTGAA
TGCCACCTACTTTAAGTTCCTGCTGGACTTCCTGTACTCGGGGCAGACGT
GCATTACCTCACGGGATGTGAACTATCTGCACGACCTGCTGCTGCTGCTG
CAGATCAAGTCGGACAGCTGGAAGACCACCGACTCCGCCTATCTGAGCAG
CAAGTGCGGCGGCCTGCGGGATCGGGCCGACAGGCGGAAGCAGCAGTACA
CCAGCCCACAGAATTTGGAGCCGGATCAGACGCTCAAGTACGAGGTGGAC
AGCGTGGATGAGTCGCGCAACGCCGCGGATTTCTCGTCCGCCTTCAACTC
CAACGACAATTGCGAGAGTGCGGCCGAGTGCGAGCGGAGTGGTGGCCACA
ACAACAAGGAGGAGGACGAGGACGACTGCACCCACAAGGACAACAAGAGC
GACAAGGACACGGACGAAATTGTAAATCTCTCGAATGCACCGCCCAGCGG
CACCAGCGGCAGTAACAGCAACATCAGCACCAGCAGCAACCACCAGCAGC
AACAGCACCACCACCATCACCACCACAACCACAACAACAACAATAATAAT
AACAACAACACAGCAGCAGCTCAACCATAAATCCCGTCAACCTTTCACTC
GACCTTCGGACGAAAACGAGAACTCGGCGAGCAGACCCTGGGATCCGGAT
CAGACCACAGCGGCATCGACCTGTCAGTGACAGCGAGCGAAAGCACGAAA
CGGAAGGTCTTGTTCTTCGACTCGCACAAGGATGTGATGAAGCCGCTGTC
CGATGGGTCGGACATCACCACTCGCCGGAAAACTACGTGTACGCCGCATC
GGAAGCGGCGACCCGGATTCCACAACACGCCAGAGCGACAACAGCCGTCA
CTTCGTACCACACAGCCTACTGAGAGACTGCCCTTGCCCAAGTCCAAAAG
TCCCCCATTCCGGCTTGTATCGGGAAAAATGCTGCCCCTGGGAGAGACAG
AACCTAAGGATCACTGACCCGGACAGGAACATCCTGTCGTGGAGGGACA
FMO07455.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ken-RA | 3070 | CG5575-RA | 600..1744 | 9..1144 | 5320 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23875149..23876116 | 186..1144 | 4180 | 97.8 | Plus |
| 2R | 25286936 | 2R | 23874923..23875095 | 16..188 | 865 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:41:38 has no hits.
FMO07455.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:11:55 Download gff for
FMO07455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ken-RA | 598..1742 | 9..1144 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:47 Download gff for
FMO07455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ken-RA | 600..1744 | 9..1144 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:25:54 Download gff for
FMO07455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ken-RA | 600..1744 | 9..1144 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:25:54 Download gff for
FMO07455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23874920..23875094 | 10..187 | 97 | -> | Plus |
| 2R | 23875151..23876116 | 188..1144 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:47 Download gff for
FMO07455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19762443..19762617 | 10..187 | 97 | -> | Plus |
| arm_2R | 19762674..19763639 | 188..1144 | 97 | | Plus |
