FMO07460.5prime Sequence
1182 bp (976 high quality bases) assembled on 2008-10-22
> FMO07460.5prime
CAGTCGACATGTCCGGTTCAGGTGGTGTGGCCAACTCGTCCTCCACAGCG
GCGGCCAACAATACCGCCGCCACATTCCAGCACATCTTCGAGCAGCTGGT
ACAGCAGGGCGGCGGAAACCACAAGCTGCCCCCCAAGCAGCTGGAGCAAC
TGCGTCACCTGCTCGGCAACGTGAGGGACGCCAAGAATCTGCAGATGATC
GTGGAGAAGTTCAAGAATCTGGAGCAGTTCCACGAGCACTACGCCGCCCA
CCTGGCTAACAACAACACTGTGATCTCAACGGAAGATAGCAACGACTTGG
TTAAGGATAATGCCAGGAAGTATGGATCTGGTGGACAAACGCTAACGCCC
CGCCACACAATCGATGCCATTCTGGGCCTAAAGAATCGCAATGGCGCGGC
GAATGGCAGTGGCAGGAATCCGGAAACGGTCAGCGATGGCTCCGTTGATC
CCTCCCTGGGTGACGATGATGCCACTGATCTACGCTGCGGCATGACCCTG
ACGCAGTTGCGCAGCATGGACAATCACATGGCCAGTATGCTGCAGCAGCA
CGCGAAAAACGGCGGAGCCCTGCCCTACGGTCCACCAACTCCGCCGGGGG
GTCAGCAGCCCCAGGTGCCGAATGCCACGCCCCTGCACCATGGACAACAG
ATGGGCGGCCAGGCGGGACATGCAACACATGCCGGACATGGTCATCCTAC
GCATCATGGGCATGCGCCCTTCGGCTATCATAATGCATTTGGCTTTGGCC
AGGGCGGTCATGGGTATGGGCATCCGGAGGAGGCGGCGGGCAATTACCTC
AATTCGATGCACCAGATGGTCGAGGCCAATCAATTGCAGACCGGGAGCAA
TGGGGCCAATCCACCGCCCGCTCCGCTGCCGCCCAGTTCCTTTGGCAGTC
ATCAGCAGCATTTGGCCGCCTTGGCGGCTCAGCGCAGGAGCAGCAAATCA
ACCACAGCAAATACGCCAAGTCATCGCCACCTGGAGCCGGTCCTCCTCCA
CCGCCGGGTGCCTACTTTATGGAATCCAGAACGGGCCTGTCGCCCGTCCA
AATCACTACGACGACGTTCATGTCCTCGCCCAGCGATTGAGGAGGATGAC
AAGAATGCGCAGTGCACTTGATGACTCGCGCCCATCTCTGCATGTCACGT
GCCTCAGCCAATGCTGCGCACTGTGGTAGTAT
FMO07460.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:14:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rx-RB | 3267 | CG10052-RB | 388..1489 | 8..1100 | 5100 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20922458..20923048 | 438..1027 | 2740 | 98 | Plus |
| 2R | 25286936 | 2R | 20917140..20917417 | 8..285 | 1390 | 100 | Plus |
| 2R | 25286936 | 2R | 20918455..20918610 | 284..439 | 780 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:14:13 has no hits.
FMO07460.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:11:46 Download gff for
FMO07460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rx-RA | 354..1471 | 1..1109 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:26 Download gff for
FMO07460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rx-RB | 381..1498 | 1..1109 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:11 Download gff for
FMO07460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rx-RB | 381..1498 | 1..1109 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:11 Download gff for
FMO07460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20917133..20917417 | 1..285 | 98 | -> | Plus |
| 2R | 20918457..20918609 | 286..438 | 100 | -> | Plus |
| 2R | 20922459..20923048 | 439..1027 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:26 Download gff for
FMO07460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16804638..16804922 | 1..285 | 98 | -> | Plus |
| arm_2R | 16805962..16806114 | 286..438 | 100 | -> | Plus |
| arm_2R | 16809964..16810553 | 439..1027 | 98 | == | Plus |
