FMO07461.5prime Sequence
1219 bp (1003 high quality bases) assembled on 2008-10-22
> FMO07461.5prime
CAGTCGACATGACCAAAAAACTAGCTCTGAAACGCAGAGGAAAGGATTCG
GAACCCACAAATGAAGTGGTGGCCAGTTCCGAGGCTTCCGAAAACGAGGA
GGAGGAGGAGGACCTGCTGCAAGCTGTAAAAGATCCCGGCGAAGATTCAA
CAGATGACGAGGGCATAGACCAGGAATACCACTCGGATTCCAGTGAGGAA
CTGCAGTTCGAGAGCGATGAGGAGGGCAACTACTTGGGCAGAAAGCAATC
TTCATCAGCTGAGGAAGATGAAGAAAGTAGTGATGAAGAGGATAATGAAG
AGGAGGAAAGCACTGATGGAGAGGAAGTGGAAGATGAGGAGAAGGATTCC
AAGTCAAAGCAAACAGACGATAAGCCCAGTGGAAGCGGTGCCGCGTCTAA
AAAAGCCCTTACAGCAGAGCTCCCGAAACGGGATAGCTCGAAGCCTGAGT
ATCAGGATTCAGATACCTCCGACGAGGAGGACATAAGAAATACTGTAGGC
AACATACCCATGCACTGGTACGACGAATACAAGCACATCGGTTACGACTG
GGATGCCAAGAAGATTATTAAACCACCACAAGGAGATCAAATTGATGAGT
TCCTGCGTAAGATCGAGGACCCAGACTTTTGGCGTACCGTCAAGGATCCA
CTTACCGGTCAGGATGTGCGCCTAACAGACGAGGACATTGCTCTGATCAA
GCGCATCGTTTCGGGTCGCATACCCAACAAGGATCACGAAGAGTATGAGC
CCTGGATCGAATGGTTCACATCGGAGGTGGAAAAGATGCCCATCAAGAAC
GTACCCGACCACAAACGCTCTTTCCTGCCCTCAGTTTCCGAGAAAAAGCG
CGTCTCTCGCATGGTGCACGCCCTCAAATGGGCTGGATGAAGACCACTGA
GGAGTGGAACGCGAGAGCAGGCCAAGCGCGTCCCAAGTTCACATGCTGTG
GGAAACGGACACCAGTCGGGAAACCATGCGCCCGCATCACGATTCATCTT
CTGCGCCAAACGCGACTTCCTGGTCATGCCGAGTTCTTACATTCACCGTC
TGAAGTATCTTTTGATGCAAGTGGACAACGATGCCTTAACTAAGGACTAC
CACCAAGCCGCAGCTGCCTTCATGCCAGAAGTCAGGTCGCTGAGGAGGTT
CGAATCCGGAACCCTCGGAGAGCGTTTCTGTCTGTGATCAGGATATCTTT
CAAGACGATGTTATTACTC
FMO07461.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5033-RA | 2514 | CG5033-RA | 69..1223 | 9..1145 | 4900 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17789917..17790849 | 109..1034 | 4135 | 98 | Plus |
| 2R | 25286936 | 2R | 17789747..17789849 | 9..111 | 515 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:35:09 has no hits.
FMO07461.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:12:02 Download gff for
FMO07461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5033-RA | 49..1102 | 1..1048 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:47 Download gff for
FMO07461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5033-RA | 62..1115 | 1..1048 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:22 Download gff for
FMO07461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5033-RA | 62..1115 | 1..1048 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:22 Download gff for
FMO07461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17789740..17789848 | 1..110 | 96 | -> | Plus |
| 2R | 17789919..17790868 | 111..1055 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:47 Download gff for
FMO07461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13677245..13677353 | 1..110 | 96 | -> | Plus |
| arm_2R | 13677424..13678373 | 111..1055 | 97 | -> | Plus |
