FMO07462.5prime Sequence
1224 bp (1032 high quality bases) assembled on 2008-10-22
> FMO07462.5prime
CAGTCGACATGGCCGATTCAGATTCGAATGAGGTCCTAATTGAGGAAATA
GACAGCAACGATGTGCCGGAAAACGAATTGGAGCAGTTCCAGGAGACAGA
GCCGCTGCGCGTGGTAGACATCATCGACTGCGATACAGACGGCGAACGGC
GCTGCATCGCTGATGACGAGGAGGAGGGTGCGCTGATTAAGCGCTACGTG
CAGGGTGTTCAGTGCCTAGAGTTCCCGGACTTCTGCACCAAGCTGGAGGC
CAGCGACGAGGATGAGGAGGGCAATGATGAGGAGCCCAGTGAGGCGGCCG
GCAGCATCGAGAAGCCGAACACTTCGGCGCAAGCGAAAACGTCACAGGAA
CAGTCGACGGGAAGTGGTCGTTCTGGAGGAGGTGGCTTTCGGAAAAGCCA
ACTAAGCACCGCCCTGCAAGGACTGATGGGCGAGGCCAATCTGAGCTTTG
TGTACGGCCGCTATGAAACAGCCGAGCGCATCTGCATGGAGATCATCCGA
CAGAATCCACTGGCCAGTGAACCGTTTTACACGCTGGCCGAGATTTATGA
GAACCGTGATGAGGTCAAGTTCCTGAACTTCTCCACATTGGCGGCCCACT
TGAATCCCCAGGACCGAGACATGTGGATACGTGTCTCCGATCTGCTGGTG
CAGCAGGGCAACTTGGCCCGTGCGCGTCTCATCTACACGAAGGCCATCAA
AATGCTGCCCAAAGTGTACCAGCTTCGGCTGCGTAAGGCGCAGCTGTTGC
AAAAAATGGGCGAAACCAATGCCTCCATGTTTACGTACTTGAAATGCTGC
CACTGATGCCCCCAGATGAGTGGAAAATGTGCCTGAATACGGCCAAGAAC
GTAGCCCGATACTTTCATGTGCTGGAGAAGCACTCGCTTGCCCTAGAGGC
CATGGAGGGGCGTACAGTGTGTGTGGTGCGCGATTCACCCTGAAGATATA
ACATCTACTTGGAGCTGCTGATCCTAAATAAACAGTATGCCAGGGTTCTG
CCGGTGCCTGCGAGAGCGCACAATTTTGAGCTGAGAACGACAGAAGAGAG
TCTTGAACTTTATTACTTCTGGCAGATTCCAAATGAATATGTCCCGACTG
CGGGCAGCTTTGGCGTCAGTCCATCCAATGCGGACCACGATTGGCTGGCT
ACTATCGAAGTCCAGAGACATCTCAATGACGGGATATAGTTCGAGACTTA
TACTATGTACACACTCCATCAGGC
FMO07462.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8950-RB | 3248 | CG8950-RB | 29..1181 | 9..1148 | 5115 | 97.1 | Plus |
| CG8950-RA | 2708 | CG8950-RA | 29..1181 | 9..1148 | 5115 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17061513..17062606 | 1095..9 | 4865 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:38:09 has no hits.
FMO07462.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:20:37 Download gff for
FMO07462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8950-RA | 24..1098 | 1..1071 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:15 Download gff for
FMO07462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8950-RA | 24..1098 | 1..1071 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:44 Download gff for
FMO07462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8950-RA | 24..1098 | 1..1071 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:44 Download gff for
FMO07462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17061498..17062611 | 1..1107 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:15 Download gff for
FMO07462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12949003..12950116 | 1..1107 | 97 | | Minus |
