FMO07464.5prime Sequence
788 bp (788 high quality bases) assembled on 2008-10-22
> FMO07464.5prime
CAGTCGACATGGGCAATCATAAAGTTCTTCGATCGGCAGGAAGCAATTTG
CGCTATTCGATGTACGAGTTCATTGACGCGGTACACAAACGTTCTATTAT
ATGGGAACGAAGCCACCCAAACTTCCATAACCGCGAACTCAGAGATGAGG
CCTGGCAGCAAATTGGCCACGAGCTTTGCTCGAATTTTGACGACTCCAGC
GAGCCGGAGAAGCAGGAAATAGTTAAAACACTGCTCAAACGTTGGAAAAA
CACGAGGGACAGCTACCTACGGGTCAACCGACTACGTCAAAGTGGCGAGG
AGGTGGCCAGAGCTTCCTACATCTACGAAAAGGAACTGAGTTTCCTGCTG
AACGTGAAAGCAGAGTCGGAGGACGATGTAGAATCCTTGAAGGAGCAACC
CAAGCCCCAGGCCAAACGGAAGCGAGTGAGCACTGCCGCACAGAGATCTG
CAAAGACTCCACGAAAGAGAAACTCCGACCAAGAATCGAATATTGAGCCT
GCCATCCGCAATCCAGCCATACCAAGCAACATAAATACGGTTCTGGGAGA
TCTGGGCTGCGCCAAGGAGGACACCGCCACTCCGGAAATCGCATATATTC
CACAGTTACCATCAGATCCACCCTGCAGTACAAATACCGCCTACTTGTCC
GCCGATCCTGATCAGGCCTTCTTCGACACCATTAAGCCTCACATGCAGCA
GATGTGCGCCGATCGCAAGCTTGACTTTCAGATCGAGGTCCTGAAAATCC
TACGAAACTTCAAGCCGAATGCAAGCTTTCTAGACCAT
FMO07464.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hng2-RA | 1207 | CG8359-RA | 45..806 | 9..770 | 3810 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8806631..8807180 | 221..770 | 2750 | 100 | Plus |
| 3R | 32079331 | 3R | 8806366..8806579 | 9..222 | 1070 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:09:31 has no hits.
FMO07464.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:12:05 Download gff for
FMO07464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8359-RA | 32..801 | 9..778 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:18:26 Download gff for
FMO07464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8359-RA | 45..814 | 9..778 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:51:52 Download gff for
FMO07464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hng2-RA | 45..814 | 9..778 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:51:52 Download gff for
FMO07464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8806366..8806579 | 9..222 | 100 | -> | Plus |
| 3R | 8806633..8807188 | 223..778 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:18:26 Download gff for
FMO07464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4632088..4632301 | 9..222 | 100 | -> | Plus |
| arm_3R | 4632355..4632910 | 223..778 | 99 | | Plus |
