FMO07466.5prime Sequence
1237 bp (1050 high quality bases) assembled on 2008-10-22
> FMO07466.5prime
CAGTCGACATGTTAAAGGACGCCCACCAGAAGTTGATTAAACATCGCCAA
TCGACGAAGCTCTCCATGACCGACTTCGCTTGTCAGGCGGCGCCTGTAAA
GCAGCCCCTGCCGCTAGAATTGCCGCTGCCTTTGTCAGTGCAGCTACAGC
TTTTAGCAAAGACTCCGACCAGTGATCACGCCCCAATGCACTCTACGCCT
CCGACGACCCCGCCTACGCCACCTCCTCTGCCCTTGAACATGAGTCAATC
GGCATCGGCGGTAACGGAAGCTGCTACTCCAGAAAACAGTCTGCCTGCCA
CACCACCCTCAGAAGGTGCACTAGCTGTACCATCGGCCCCACAGGATCAC
TACAGCCTACGCTGGAACAACCACCAGAACCACATCCTGCGGGCATTCGA
TGCACTGCTGAAGACCAAAACGCTGGTGGACGTGACCCTGGTCTGCGCGG
AGACTTCGATCCGGGCTCACAAAATGGTGCTCTCCGCCTGTTCGCCCTTC
TTCCAGCGCGTCTTTGCGGAAACTCCCTGCAAGCACCCAGTTATAGTGCT
CAAGGATTTCCGGGGTTGGGTAGTGCAGGCCATTGTAGACTTTATGTACC
GCGGAGAGATCAGCGTGCCCCAGCAGAGACTCCAGACACTCATCCAGGCC
GGAGAGTCGCTTCAAGTCCGAGGCTTGGTGGAGAGCTCTGTCCCAGAACA
CACTCCCACACCGGCCGCTTCCCCCGATGATTTCGGGATGTTGGACACCT
CTATGCTGTCCTCTACCTTTGAGGACGAGTGTCCGACGATGGTCCGACCC
TCTAAGGTGGAAAGCTTTTGATGCCGTCCGCCCGACTGTTTGGCAACGCT
TCAAGCGCCATTGCTGCTCTAGGTTTGCGACGAAAACGAGAGCAGGAGTC
CGACCGCGACTTGGAGAGTGATCAGGAGCTGGGAGCAGTTCACCTATGCC
ACGACGTAAGCAAGCGCGACGGCGGCGCCGCTCCGGCGATGTGCCGCACG
ACTTTACCTAAAACAAAACCGATGCAGAATCCTGCAAACTGTGATCAGCA
CGAGCTTCTAAGCGGAGCGAAAGAGATCAGAAAAGCTCCTGATCAGATAC
AGCCAAGGGAAGCGAAAAAATAGTCCGTCCCCACCAAACGTTGGTGTAAG
CGGCTCTTAAGGACAAGTCCTGAAAGGAAACTCGATATCACCGCAGTCCT
AACGGATACCCATCTACCTCTGAACCGTGTTCGCAAT
FMO07466.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lov-RF | 4185 | CG16778-RF | 548..1699 | 8..1145 | 5285 | 98.1 | Plus |
| lov-RE | 3826 | CG16778-RE | 189..1340 | 8..1145 | 5285 | 98.1 | Plus |
| lov-RD | 4712 | CG16778-RD | 443..1594 | 8..1145 | 5285 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 25095408..25096464 | 1060..8 | 5055 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:59:50 has no hits.
FMO07466.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:12:08 Download gff for
FMO07466.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tkr-RA | 457..1595 | 1..1129 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:29 Download gff for
FMO07466.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lov-RD | 438..1576 | 1..1129 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:20 Download gff for
FMO07466.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lov-RD | 438..1576 | 1..1129 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:20 Download gff for
FMO07466.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 25095331..25096469 | 1..1129 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:29 Download gff for
FMO07466.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20982854..20983992 | 1..1129 | 98 | | Minus |
