FMO07468.5prime Sequence
1217 bp (1022 high quality bases) assembled on 2008-10-22
> FMO07468.5prime
CAGTCGACATGCCCGCCCACTGCGCCGTGATAAATTGCAGCCATAAGTAT
GTGCACGCGGGCAGCATTTCATTTCACAGATTTCCATTCAAACGGAAGGA
TCTTCTACAGAAATGGAAGGAATTTACCCAGAGGAGTGCTCAGTGGATGC
CCTCAAAATGGAGTGCGCTGTGCAGTCGGCACTTTGGTGATGAGGACTTT
AATTGCAGCAATAATCGGAAAACGCTTAAGAAAAATGCTGTGCCATCAAT
TAGGGTTTCGGAAGATGACTCCATGAGTGGGCACTTGGAACAGGTGTCCC
CAAGCAATAGGCCAACGCACAAGCAAACTCTTTCTAGTGCCGCCGAATCA
GCAGCAACAGGTGTTAAAGCCACTTGCCGCTTTTGTGGTTCCTCGGCCAT
CAATTGCTCCTCGTTTGACAAGAGTTTTGAGCTCTTTGGCATGATCCAGA
AGTGCTTTCCTACGCTACAGATTCTTCAGGACGACACCTTGCCCAAGGAA
ATATGCCAGGAGTGCTGCCTCCAATTGGAGCGCTTTTCCCAGTTCATCGA
TGTGGTGATGTTGGCGCAGAGTGAATTGCAAAGAAAATACCGCCGACAAC
TGAAAATCAAACAGGAACCCTTGGTTCGTGTGAAACAGGAGGCCTGCGAG
AGCTCGGACAATCTTTTTCCTGATGAACTGGACATGGGTTTGGAGCAGGA
CGATGGCTGCGATCAGGAAGAAACTGAACAAAAGTTTCAGTTCTGCGAGT
TCCCTATGCTAAATGCCCAAGACATTATCAACAATTGTGATATCATGGAG
ATAATCAATCTGGACGATCCGTTTATCAATATTCCAGACGATGCGGATGT
GGGACAGTCGGAGAGACTACAGCCTGAAGACGGCTAATGAAATGCTGCAA
ACGAACTCCTAACCGAAGAGCACAATTATGCGAAGAGAGTGGCACTACCC
CCGCATCAGTACAAAACGGAAAAGTGGAGGACCGATGCTGCGCCAGACGC
AGCTCCTCCGCCTGCTGATCCCCCTCCTCTTCAGATAATAATAAACCTCC
CTCGCCCCGAACCGCGCTCATGCAGCCCATTGTGACCATTAGGCGGATCT
ACCATGATCCTGCGAGCTGCTGCCCAGCTGTCCTCCCAAGCTGATCACCA
ACTCGACTTACGATTTGTACCGAATCGTCGACGCTTTCGTGCACAATGCA
CTGTGCAGCTCGCCTAA
FMO07468.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10431-RB | 2670 | CG10431-RB | 68..1160 | 9..1088 | 5070 | 98.4 | Plus |
| CG10431-RA | 3355 | CG10431-RA | 68..1160 | 9..1088 | 5070 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18974903..18975926 | 78..1088 | 4475 | 97.9 | Plus |
| 2L | 23513712 | 2L | 18974777..18974847 | 9..79 | 355 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:33:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Stalker | 7256 | Stalker STALKER 7256bp | 634..689 | 439..383 | 111 | 68.4 | Minus |
FMO07468.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:12:11 Download gff for
FMO07468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10431-RA | 68..1220 | 9..1138 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:36 Download gff for
FMO07468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10431-RA | 68..1220 | 9..1138 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:22 Download gff for
FMO07468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10431-RA | 68..1220 | 9..1138 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:22 Download gff for
FMO07468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18974777..18974847 | 9..79 | 100 | -> | Plus |
| 2L | 18974905..18975986 | 80..1138 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:36 Download gff for
FMO07468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18974777..18974847 | 9..79 | 100 | -> | Plus |
| arm_2L | 18974905..18975986 | 80..1138 | 97 | | Plus |
