FMO07471.5prime Sequence
1188 bp (1014 high quality bases) assembled on 2008-10-22
> FMO07471.5prime
CAGTCGACATGAACGAAGACCATCTCGAGGACACTCATCTGTGCATCAGG
TGCAACGCAACTATACTTGGACTCTCAAAATATATTGATCATCGAAAACG
GAACTGTCTTATAACAGGAAAGCAAAATGCTTCGCCAAAAACCGATGGAC
GAACAAGAATCTCTGCTGACACTCATGTTTCGGCGACGCTTATCAGTAGC
AGTAATTTGGATCATTCATATGATGGCTTCCATTTCACTGAACCGGAGGC
TCCAAGTAGTTACCTTCGCAAAACTGCCGCCAGTCATGGCGGTAAGACCT
CAAAGTCCTTGACTGAAGCCTATGATCTCCCATACGAACTTGGAGCCGAT
CTCTTCTTTTCGTCCCTACAACTGCAGAGCGTCGCCACGGGTGGGAAAAT
AGGATCGGTACCCCGTCAAGAGCGAAGCAAAGATGAGTCCTGGTCCGCGC
CAGCTGGCGATCCCCTACTGAAAGCAGTGAGGGAGAACGATGAAACTGTC
TTTAAGCCGCTTCACTTTGACCATGAGTACCCAGAAGCGAGTGATGAGGA
GGATGATGAGGATGAACACGAGGAATTTGATGCGGAAGAAGATGAGGAAG
AGTACGATGCAAGGCGTCACTCACCGCCCATTGTGCCCGCCAGTCACACA
GGTGGTAAGTGGAAACCAGAACAGCGGCCGCAGCTACGACATCCGCATAT
AGAACGCCTCTCGCCAAGTTGGGATGAGCCCCCCGAAGAAAACTACACTC
ACCCTCCAGCGGACCATACCAAGGGCAAATGGGTTCCGGGTAGCAAGCAG
TTGGAGTACCGCGAAAATTTGGATCTTACCAAGCTGGACCAACCGGGAGC
TAGTTATTGGTGCACATTTGCTGCAGCGGCTGAAAGTCGCTTATATTATA
ACCAACATTTGAGGAGTGGCTATCACATCAAAGAGCTGAGCAGAGTGCGA
ATTAGAGCAGCTACTCTGGGCAGGGAACTTACCCTAGCAAGACTTCTCAA
TAAAAGACGATGCGGAAAAAATGACCAAAGCACCGAAACGACGGAGAAGC
ATCTTTCTGGCATGCGATCTATGCCGGCCACCATGCAGCATTGATGGCCA
ACTTATTCCCATATCATTCCAGATCCACACCGGTCAATAAGAGCAGCTGC
TGCGAAAACCTAGCCATGGGGAGCATATGTGAAGCCAA
FMO07471.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31612-RB | 3433 | CG31612-RB | 208..1292 | 8..1078 | 4985 | 98.2 | Plus |
| CG31612-RA | 3285 | CG31612-RA | 60..1144 | 8..1078 | 4985 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21774420..21775441 | 1021..8 | 4680 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:35:06 has no hits.
FMO07471.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:11:58 Download gff for
FMO07471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31612-RA | 58..1153 | 8..1090 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:45 Download gff for
FMO07471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31612-RA | 60..1155 | 8..1090 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:20 Download gff for
FMO07471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31612-RA | 60..1155 | 8..1090 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:20 Download gff for
FMO07471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21774357..21775449 | 1..1078 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:45 Download gff for
FMO07471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21774357..21775449 | 1..1078 | 97 | | Minus |
