FMO07482.5prime Sequence
1245 bp (1032 high quality bases) assembled on 2008-10-22
> FMO07482.5prime
CAGTCGACATGACAATTTCCTGGCGCGCCTTGTCTCATTTCCTTATTCCG
CAGAGCGACTACGGCGAGGCCAAGACGCACCTGGAGCAGCTGCAGCAGAC
GCTCACGCACCTGGACCACCCGCACCACCACCACGCACACCATCCGCACC
ACCACCTGGGGCTCTACCATGGCGCCCTGCCCAACACATCCACCATAACC
ACAGACTCGGTGGTTTCCTGTGTCAGCTCCACACTGCCGGCGGTGGCCAA
GGCCATTTCCGCATCCTCCAGCTGCGATGGCCTGCAGTCGGAGCGCAAAA
AGTGCCCCATCAGCGATCTGGATTCAGGTGGTCATGGTCATGGTCAGGGG
CATGGCCTCATGGAGGCCATCTGCGCTGGCCAGAAGACGTCACCTATACC
ACCGCCGCCACCACCTTGCTGCTTGACCCTGGGCGAAAGCTCATCCTCGC
CGAATCCCATCGCCACGGCCGCCTTGATGAACGCTTCCACCTCCGGATCC
TCGAGCGCAGGCGGAGCAAGTGCCTCTCTCTGCAACGATCTCACACGGGA
ATCTTCCTGGTACGCCCACCATCATCATCACCACCATCACCATCACCATC
AGTTGCCCGACGAGCTGGTCATGTATGCCACGCCCACTCCCACGCCGGCA
ATCGGGAAATTCGGACTGGACACTTCCACCGAGGGTTACTTGAACGCAAG
GTACAATGTGAATGTCAAAGGCGTGCGGCATGATAGAACATCGAGTTTCT
TTGACATACCCGCTGTGACGCACCCGCACAACCATCCACACCCACATCCG
CACCCACATCCGCACCCGTACTGCTACAGATTTCCATCATCGCCACCCGC
GGGCATTCTGAAAAGAGCGACGAAGAGCAACCTCGGCCGCCGTATACTGC
AGCGACGTGTCCTCCGGACAGCACTTTCCGCCACACACAAAGATCGAGCA
CGCGGACTCCACCACTACGGCGGCACAGCAGCACAGCAGCAGCAGAGCAA
CAGCAGCAGCAGCAGCAGCAGCAGCACATCAGCAACCCAGCAACACTGGA
GAAGGTTGCTGCCCTGCATCGCACACATCATTCCACCATGGGTCCACATG
GCATCGCAGCGGAGACGCAGGGCTCTCACCCCTTGAGCATTCATGCGCAT
CCGCTTCAATTAGCTAACGGCGCTATCAGCTTCAGCGGTATTGTGCCAGG
CCTGCTTGATGCCCCCAACAGTAGGAGCTGACGATCTTCATGTAA
FMO07482.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ets96B-RB | 3003 | CG6892-RB | 364..1529 | 8..1156 | 5115 | 97.1 | Plus |
| Ets96B-RC | 2804 | CG6892-RC | 210..1330 | 53..1156 | 4890 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24792724..24793253 | 8..537 | 2650 | 100 | Plus |
| 3R | 32079331 | 3R | 24793378..24793549 | 537..708 | 860 | 100 | Plus |
| 3R | 32079331 | 3R | 24796124..24796276 | 876..1026 | 635 | 97.4 | Plus |
| 3R | 32079331 | 3R | 24794323..24794444 | 708..829 | 610 | 100 | Plus |
| 3R | 32079331 | 3R | 24794593..24794642 | 827..875 | 200 | 98 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:33:25 has no hits.
FMO07482.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:12:14 Download gff for
FMO07482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets96B-RB | 358..1414 | 1..1051 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:38 Download gff for
FMO07482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets96B-RB | 358..1414 | 1..1051 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:23 Download gff for
FMO07482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets96B-RB | 358..1414 | 1..1051 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:23 Download gff for
FMO07482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24792718..24793253 | 1..537 | 99 | -> | Plus |
| 3R | 24793379..24793549 | 538..708 | 100 | -> | Plus |
| 3R | 24794324..24794444 | 709..829 | 100 | -> | Plus |
| 3R | 24794596..24794642 | 830..875 | 97 | -> | Plus |
| 3R | 24796123..24796282 | 876..1032 | 95 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:38 Download gff for
FMO07482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20618440..20618975 | 1..537 | 99 | -> | Plus |
| arm_3R | 20619101..20619271 | 538..708 | 100 | -> | Plus |
| arm_3R | 20620046..20620166 | 709..829 | 100 | -> | Plus |
| arm_3R | 20620318..20620364 | 830..875 | 97 | -> | Plus |
| arm_3R | 20621845..20622004 | 876..1032 | 95 | -> | Plus |
