FMO07486.5prime Sequence
1238 bp (1061 high quality bases) assembled on 2008-10-22
> FMO07486.5prime
CAGTCGACATGATATTCCCAAGAGAAAAGAAGGTGTTATGGCGTTATGCG
TCCAGCAACAATCCGAGCAATGGGGTGTCAGCAGCACCGCCCGCTCAGCC
ACCACGGCCGCCTCCCCCTCCACATCGACCCCGCCCTCATCAGTGTACTC
CAAGCTTTGGTTATTCCTGCAACGAAGAGGACTCCTTGGCAATGCGACAG
ACGCCGCTGCCGCCTTACAGTTCGATAGCCTGCGGGATGGACTGCTCCAG
CTCAAACTCCAGCTCCTGTGGCCAGAGTTTGAGTCTGAGTCAGGGGCAAG
GCCACAACAACAACAACAGCCATCCGTACCGCCGTCTGCCAAATCACATG
GATGTGTTGCCGCCGCCTCCGTCAGCGTGCGACCGCTGCTGTACCGCTCC
TGGTTACAGCTGCGCAAGCTCCTGCGACGATATGTTGATCGACGGAAGCG
ATCTGGATCAGGATCGGAGTCCGGATCAGGGACAGGTTCAGCCGGTGGAC
CGCCGGATGATAAGTGCCACCACCTTTACGACCATGTTTCGGAAATGCTG
CGGCGGCGCAACGGAGTCCACCAGCGGATCCACACTTACGATTCCAGTCA
GCACGTCCAGAGCCACCGCTCATCCTCCCCAAACGCAAGCCCAGAATGGC
AAACGATTTCGCGAGGATTTCGAAGCGCTAATGAAGCAACTCAAGCGCAA
GCAGAGAAACGAACTTCTGCTTGCAGTCAAGAGTCGCCTAGATCCGCCGA
CCAAGACGCAGCGCGATGTCGTGGAACCCACCACCACCACCGCACCCACC
TACCTGCAGTGCATCCTGATACCGTGCAAAACGCAAACGGTTTGGGAGCC
GCACGTGACCGCCAGTCGCTGTTTTTCTGGCGGGAATTGTGAACGCAAAG
AACTGAAGCGACTGCCCACTTGTCCGCCGCCCGCGACTGCATCTACATGT
GCTGCAATCCGCTGCATTGGTTTCGCATCCTGCAACAGCCCGAAACAGAT
CCCAAACCGCGTACCACGCTCCAAAATGCTGAAACTGAAGATGCAGATTT
CGAAAAAAACTCGCGACGATGCAAGTCGCAGCGCTCAGCACGTGGGAGTG
CGAAAGCACTACCATTCGACATCTACAGCGGCTCTTACAGATCGGTACCT
GATGAAAGAATAACATCAAGTCAGTGGTTCAATGCCTCTGGGAAGTGCAC
GCGGCGGGATTCTCAGCCCAACGAAGTGCACTCAATAT
FMO07486.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dad-RC | 3751 | CG5201-RC | 771..1906 | 8..1127 | 5115 | 97.7 | Plus |
| Dad-RB | 3550 | CG5201-RB | 570..1705 | 8..1127 | 5115 | 97.7 | Plus |
| Dad-RA | 3767 | CG5201-RA | 787..1922 | 8..1127 | 5115 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17057710..17058704 | 8..998 | 4745 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:02:07 has no hits.
FMO07486.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:07:22 Download gff for
FMO07486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dad-RC | 766..1897 | 1..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:37 Download gff for
FMO07486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dad-RA | 782..1913 | 1..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:57 Download gff for
FMO07486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dad-RA | 782..1913 | 1..1119 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:57 Download gff for
FMO07486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17057705..17058704 | 1..998 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:23:37 Download gff for
FMO07486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12883427..12884426 | 1..998 | 99 | -> | Plus |
