FMO07493.5prime Sequence
1215 bp (988 high quality bases) assembled on 2008-10-22
> FMO07493.5prime
CAGTCGACATGACGCATCTGCGGTCGGAGGATAAGCCACAGTCGGAGGAG
CGGAAGTCTGTGTTCAAGGAGAGCAGCTGCATCTTCCGGCGGAATCGAGC
CCTCGGCTATGTGAGCAACCAGGTTCCAGCAGTCACCCGCTACGTGCAGC
GTCGTCGGGACACTTTGCTGATCACCTGCATCGGCAGATCTTTTCAGGTG
TACACCGCCAACCACTTTCGCCTGCTGCACGTTAGCGGATTGCATCCGGA
CGAGATTACGGCTCTGGCCACGGATCGACTGCACACGTACACGGCGAGCA
ACAAGTGTATCTACGCCTGGCGGGCGGGCAAACACATCCGGCACGTGTAC
CGTGGCCACCAGAAAGATGTCCACCTCCTGCTGCCTTTTGGTTCCAGTTT
GATAGCCATCGATAGGCAGAATGTGTTAAAAGTGTGGAATATTTCAACCG
AGGATGTCTATTTGGAAGTGCCCTTCCGGTCTGAGGAGTTCCAGATCACA
GCTGTGACCCATCCGCCCACGTACATCAATAAAATAGTACTAGGCTCCCA
GCAGGGCCAACTAAAGATCTTGAACATAAAGAAGAACAGTGTGGTGTGCA
CTTTGAGTCACCACGACAGCAGGATCACCTGCATTGAACCGTCCCCTGCT
TTGGATGTCGTGGCCGTGGGACACGGGGATGGCACTATTATCTTGCTTAA
CCTTAAGTTCGACGAGGTGCTTATGAGCTTCCAGCAGGATTGGGGTCACG
TCACCAACCTTTCCTTCCGTACCGACGGCCCACCAATCCTTGTGTCCGCC
TGCAGCAATGGTTACATGGCCTTCTGGAACCTGAGGAGCGCAAGTTAGCC
GGTCAGCTGCAAGCGCACGAGGAGTCGGTGACCACGGCCATTTGTCTGCC
CAGCGAGCCCGTGGTCTTCACACTTCACAGACAATTCAATGAGGATGTTT
GTTTCGATATGCCAGATGGTGGTGCAGACAGCTGAGATCCGCGAGGGAAC
ACACAAAGGCGTCGTTTGTATTCGCTACCACGGCCAGCTCGGGGCGTATC
AATTCTCTCCTTCAGGCGAAGAACGCACCATGGAAGTCTTCTCCCACCAT
TCGATCGCTGAACAGAGACATGGCCAGGGCTACCTCAATCCAAGGCCCAA
GAGAAGAATCGCTGGACGATAGTGCAATGCACCCCTACTGGATTCCACTC
GATCGCTCGTCGGCG
FMO07493.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9799-RA | 2939 | CG9799-RA | 109..1273 | 9..1163 | 5135 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13387513..13388601 | 1094..9 | 4765 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:41:44 has no hits.
FMO07493.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:07:32 Download gff for
FMO07493.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9799-RA | 100..1283 | 1..1171 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:51 Download gff for
FMO07493.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9799-RA | 102..1285 | 1..1171 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:25:58 Download gff for
FMO07493.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9799-RA | 102..1285 | 1..1171 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:25:58 Download gff for
FMO07493.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13387507..13388608 | 1..1101 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:51 Download gff for
FMO07493.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9213229..9214330 | 1..1101 | 97 | | Minus |
